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5D0U

Crystal structure of the RNA-helicase Prp43 from Chaetomium thermophilum bound to ADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003724molecular_functionRNA helicase activity
A0005524molecular_functionATP binding
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
A1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue ADP A 801
ChainResidue
ATHR121
APHE360
AASP391
AARG435
AMG802
AHOH901
AHOH903
AHOH904
AGLY122
ASER123
AGLY124
ALYS125
ATHR126
ATHR127
ASER158
AARG162

site_idAC2
Number of Residues9
Detailsbinding site for residue MG A 802
ChainResidue
ATHR126
AASP218
AGLU219
ASER387
AADP801
AHOH901
AHOH902
AHOH903
AHOH904

site_idAC3
Number of Residues3
Detailsbinding site for residue DMS A 803
ChainResidue
AARG654
ATYR697
AARG720

site_idAC4
Number of Residues4
Detailsbinding site for residue DMS A 805
ChainResidue
AGLU502
AALA530
AGLY660
AMET663

site_idAC5
Number of Residues1
Detailsbinding site for residue DMS A 806
ChainResidue
AGLN711

site_idAC6
Number of Residues2
Detailsbinding site for residue DMS A 807
ChainResidue
AVAL556
AASN703

site_idAC7
Number of Residues3
Detailsbinding site for residue DMS A 808
ChainResidue
ASER614
ATYR615
AARG616

site_idAC8
Number of Residues3
Detailsbinding site for residue DMS A 809
ChainResidue
ATRP560
ALYS574
ASER690

site_idAC9
Number of Residues6
Detailsbinding site for residue DMS A 810
ChainResidue
APRO399
AGLY400
APHE401
APRO420
ATYR445
AGLU453

site_idAD1
Number of Residues4
Detailsbinding site for residue DMS A 811
ChainResidue
ATYR505
APRO729
AVAL730
ATYR731

Functional Information from PROSITE/UniProt
site_idPS00690
Number of Residues10
DetailsDEAH_ATP_HELICASE DEAH-box subfamily ATP-dependent helicases signature. ScIILDEAHE
ChainResidueDetails
ASER213-GLU222

223166

PDB entries from 2024-07-31

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