Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006400 | biological_process | tRNA modification |
| A | 0008033 | biological_process | tRNA processing |
| A | 0008616 | biological_process | tRNA queuosine(34) biosynthetic process |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051536 | molecular_function | iron-sulfur cluster binding |
| A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| A | 0052693 | molecular_function | epoxyqueuosine reductase activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006400 | biological_process | tRNA modification |
| B | 0008033 | biological_process | tRNA processing |
| B | 0008616 | biological_process | tRNA queuosine(34) biosynthetic process |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0051536 | molecular_function | iron-sulfur cluster binding |
| B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| B | 0052693 | molecular_function | epoxyqueuosine reductase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 8 |
| Details | binding site for residue SF4 A 501 |
| Chain | Residue |
| A | ALA153 |
| A | LYS154 |
| A | ASN155 |
| A | CYS188 |
| A | CYS191 |
| A | CYS194 |
| A | CYS247 |
| A | LEU249 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | binding site for residue SF4 A 502 |
| Chain | Residue |
| A | LEU209 |
| A | CYS214 |
| A | ILE215 |
| A | CYS240 |
| A | THR242 |
| A | CYS243 |
| A | CYS198 |
| site_id | AC3 |
| Number of Residues | 30 |
| Details | binding site for residue B12 A 503 |
| Chain | Residue |
| A | LEU33 |
| A | ARG36 |
| A | SER47 |
| A | GLU50 |
| A | ARG57 |
| A | CYS97 |
| A | ASP134 |
| A | LEU138 |
| A | SER139 |
| A | ASP140 |
| A | ARG141 |
| A | ALA142 |
| A | SER152 |
| A | ASN155 |
| A | MET157 |
| A | ILE158 |
| A | SER165 |
| A | VAL167 |
| A | LEU169 |
| A | PRO206 |
| A | GLY207 |
| A | LEU209 |
| A | SER216 |
| A | GLY239 |
| A | CYS240 |
| A | ASP241 |
| A | GLN244 |
| A | HOH607 |
| A | HOH608 |
| F | 56B34 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | binding site for residue PO4 A 504 |
| Chain | Residue |
| A | LYS112 |
| A | HIS258 |
| A | GLU260 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue GOL A 505 |
| Chain | Residue |
| A | ASN280 |
| A | GLY296 |
| A | LYS297 |
| F | C32 |
| F | A36 |
| F | HOH106 |
| site_id | AC6 |
| Number of Residues | 9 |
| Details | binding site for residue SF4 B 501 |
| Chain | Residue |
| B | ALA153 |
| B | LYS154 |
| B | ASN155 |
| B | CYS188 |
| B | CYS191 |
| B | CYS194 |
| B | CYS247 |
| B | PRO248 |
| B | LEU249 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | binding site for residue SF4 B 502 |
| Chain | Residue |
| B | CYS198 |
| B | LEU209 |
| B | CYS214 |
| B | ILE215 |
| B | CYS240 |
| B | THR242 |
| B | CYS243 |
| site_id | AC8 |
| Number of Residues | 36 |
| Details | binding site for residue B12 B 503 |
| Chain | Residue |
| B | GLY239 |
| B | CYS240 |
| B | ASP241 |
| B | CYS243 |
| B | GLN244 |
| B | HOH614 |
| B | HOH619 |
| A | GLU373 |
| B | SER32 |
| B | LEU33 |
| B | ARG36 |
| B | LEU37 |
| B | SER47 |
| B | GLU50 |
| B | ARG57 |
| B | CYS97 |
| B | TYR105 |
| B | ASP134 |
| B | LEU138 |
| B | SER139 |
| B | ASP140 |
| B | ARG141 |
| B | ALA142 |
| B | SER152 |
| B | ASN155 |
| B | CYS156 |
| B | MET157 |
| B | ILE158 |
| B | SER165 |
| B | VAL167 |
| B | LEU169 |
| B | PRO206 |
| B | GLY207 |
| B | LEU209 |
| B | SER216 |
| B | PHE217 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | binding site for residue PO4 B 504 |
| Chain | Residue |
| B | ILE17 |
| B | LYS112 |
| B | LEU257 |
| B | HIS258 |
| B | GLU260 |
Functional Information from PROSITE/UniProt
| site_id | PS00198 |
| Number of Residues | 12 |
| Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CgSCTkCLdACP |
| Chain | Residue | Details |
| A | CYS188-PRO199 | |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 60 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type","evidences":[{"source":"HAMAP-Rule","id":"MF_00916","evidenceCode":"ECO:0000255"}]} |
| site_id | SWS_FT_FI2 |
| Number of Residues | 48 |
| Details | Repeat: {"description":"HEAT-like PBS-type"} |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton donor","evidences":[{"source":"PubMed","id":"27638883","evidenceCode":"ECO:0000305"}]} |
| site_id | SWS_FT_FI4 |
| Number of Residues | 38 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"27638883","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5D0B","evidenceCode":"ECO:0007744"}]} |
| site_id | SWS_FT_FI5 |
| Number of Residues | 14 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"27638883","evidenceCode":"ECO:0000269"}]} |
