5CY4
Crystal structure of an oligoribonuclease from Acinetobacter baumannii
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000175 | molecular_function | 3'-5'-RNA exonuclease activity |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0004527 | molecular_function | exonuclease activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0016896 | molecular_function | RNA exonuclease activity, producing 5'-phosphomonoesters |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000175 | molecular_function | 3'-5'-RNA exonuclease activity |
| B | 0003676 | molecular_function | nucleic acid binding |
| B | 0004527 | molecular_function | exonuclease activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0016896 | molecular_function | RNA exonuclease activity, producing 5'-phosphomonoesters |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000175 | molecular_function | 3'-5'-RNA exonuclease activity |
| C | 0003676 | molecular_function | nucleic acid binding |
| C | 0004527 | molecular_function | exonuclease activity |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0016896 | molecular_function | RNA exonuclease activity, producing 5'-phosphomonoesters |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0000175 | molecular_function | 3'-5'-RNA exonuclease activity |
| D | 0003676 | molecular_function | nucleic acid binding |
| D | 0004527 | molecular_function | exonuclease activity |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0016896 | molecular_function | RNA exonuclease activity, producing 5'-phosphomonoesters |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0000175 | molecular_function | 3'-5'-RNA exonuclease activity |
| E | 0003676 | molecular_function | nucleic acid binding |
| E | 0004527 | molecular_function | exonuclease activity |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0016896 | molecular_function | RNA exonuclease activity, producing 5'-phosphomonoesters |
| E | 0046872 | molecular_function | metal ion binding |
| F | 0000175 | molecular_function | 3'-5'-RNA exonuclease activity |
| F | 0003676 | molecular_function | nucleic acid binding |
| F | 0004527 | molecular_function | exonuclease activity |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0016896 | molecular_function | RNA exonuclease activity, producing 5'-phosphomonoesters |
| F | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue CA A 201 |
| Chain | Residue |
| A | ASP13 |
| A | LEU14 |
| A | GLU15 |
| A | HOH328 |
| A | HOH385 |
| A | HOH403 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | binding site for residue CA A 202 |
| Chain | Residue |
| A | HOH316 |
| A | HOH321 |
| A | HOH328 |
| A | HOH345 |
| A | ASP13 |
| A | ASN108 |
| A | ASP113 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue CA A 203 |
| Chain | Residue |
| A | VAL40 |
| A | LYS173 |
| C | VAL40 |
| C | LYS173 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue EDO A 204 |
| Chain | Residue |
| A | VAL102 |
| A | PRO104 |
| A | HIS129 |
| A | ARG131 |
| B | GLU140 |
| B | LYS143 |
| B | ARG144 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue CA B 201 |
| Chain | Residue |
| B | ASP13 |
| B | LEU14 |
| B | GLU15 |
| B | HOH314 |
| B | HOH318 |
| B | HOH377 |
| site_id | AC6 |
| Number of Residues | 8 |
| Details | binding site for residue CA B 202 |
| Chain | Residue |
| B | ASP13 |
| B | ASN108 |
| B | ASP113 |
| B | HOH318 |
| B | HOH321 |
| B | HOH336 |
| B | HOH377 |
| B | HOH380 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | binding site for residue CA C 201 |
| Chain | Residue |
| C | ASP13 |
| C | ASN108 |
| C | ASP113 |
| C | HOH308 |
| C | HOH320 |
| C | HOH321 |
| C | HOH371 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | binding site for residue CA C 202 |
| Chain | Residue |
| C | ASP13 |
| C | LEU14 |
| C | GLU15 |
| C | HOH313 |
| C | HOH321 |
| E | HOH383 |
| site_id | AC9 |
| Number of Residues | 6 |
| Details | binding site for residue CA D 201 |
| Chain | Residue |
| A | HOH309 |
| A | HOH314 |
| D | ASP13 |
| D | LEU14 |
| D | GLU15 |
| D | HOH329 |
| site_id | AD1 |
| Number of Residues | 6 |
| Details | binding site for residue CA D 202 |
| Chain | Residue |
| D | ASP13 |
| D | ASN108 |
| D | ASP113 |
| D | HOH317 |
| D | HOH322 |
| D | HOH361 |
| site_id | AD2 |
| Number of Residues | 4 |
| Details | binding site for residue CA D 203 |
| Chain | Residue |
| D | VAL40 |
| D | LYS173 |
| E | VAL40 |
| E | LYS173 |
| site_id | AD3 |
| Number of Residues | 7 |
| Details | binding site for residue CA E 201 |
| Chain | Residue |
| E | ASP13 |
| E | ASN108 |
| E | ASP113 |
| E | HOH306 |
| E | HOH309 |
| E | HOH314 |
| E | HOH380 |
| site_id | AD4 |
| Number of Residues | 6 |
| Details | binding site for residue CA E 202 |
| Chain | Residue |
| E | ASP13 |
| E | LEU14 |
| E | GLU15 |
| E | HOH306 |
| E | HOH346 |
| E | HOH376 |
| site_id | AD5 |
| Number of Residues | 8 |
| Details | binding site for residue EDO E 203 |
| Chain | Residue |
| E | GLU140 |
| E | LYS143 |
| E | ARG144 |
| E | HOH387 |
| F | VAL102 |
| F | PRO104 |
| F | HIS129 |
| F | ARG131 |
| site_id | AD6 |
| Number of Residues | 7 |
| Details | binding site for residue CA F 201 |
| Chain | Residue |
| F | ASP13 |
| F | ASN108 |
| F | ASP113 |
| F | HOH309 |
| F | HOH312 |
| F | HOH339 |
| F | HOH346 |
| site_id | AD7 |
| Number of Residues | 6 |
| Details | binding site for residue CA F 202 |
| Chain | Residue |
| F | HOH334 |
| F | HOH351 |
| F | ASP13 |
| F | LEU14 |
| F | GLU15 |
| F | HOH312 |
| site_id | AD8 |
| Number of Residues | 6 |
| Details | binding site for residue EDO F 203 |
| Chain | Residue |
| E | VAL102 |
| E | ARG131 |
| F | GLU140 |
| F | LYS143 |
| F | ARG144 |
| F | HOH335 |
