5CY4
Crystal structure of an oligoribonuclease from Acinetobacter baumannii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-07 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.97872 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 92.710, 102.880, 184.870 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.490 - 2.250 |
R-factor | 0.1701 |
Rwork | 0.169 |
R-free | 0.20160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3igi |
RMSD bond length | 0.004 |
RMSD bond angle | 0.771 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10pre_2090: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.000 | 2.310 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.562 | |
Number of reflections | 82841 | |
<I/σ(I)> | 16.3 | 3.2 |
Completeness [%] | 98.0 | 99.3 |
Redundancy | 5 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | JCSG+e11: 14% PEG8000, 160mM Calcium acetate, 0.08M sodium cacodylate pH6.5, 20% glycerol |