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5CPE

Crystal Structure of the first bromodomain of human BRD4 in complex with benzo[cd]indol-2(1H)-one ligand

Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue EDO A 201
ChainResidue
AASN130
APHE133
AGLU154

site_idAC2
Number of Residues5
Detailsbinding site for residue EDO A 202
ChainResidue
APRO86
AASP106
AGLY108
ATHR109
AHOH303

site_idAC3
Number of Residues10
Detailsbinding site for residue EB2 A 203
ChainResidue
APRO82
APHE83
AVAL87
ALEU92
AASN140
AMET149
AHOH309
AHOH315
AHOH386
ATRP81

Functional Information from PROSITE/UniProt
site_idPS00633
Number of Residues60
DetailsBROMODOMAIN_1 Bromodomain signature. AwpFqqpvDavklnlpDYYkiIktpMdmgtIkkrlenny..Ywnaqeciqdfnt.MftNCyiY
ChainResidueDetails
AALA80-TYR139

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsSITE: Acetylated histone binding => ECO:0000269|PubMed:22464331
ChainResidueDetails
AASN140

site_idSWS_FT_FI2
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS99

218853

PDB entries from 2024-04-24

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