Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5CMQ

Crystal Structure of Zn-bound Human H-Ferritin variant 122H-delta C-star

Functional Information from GO Data
ChainGOidnamespacecontents
A0004322molecular_functionferroxidase activity
A0005506molecular_functioniron ion binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005764cellular_componentlysosome
A0005776cellular_componentautophagosome
A0005829cellular_componentcytosol
A0006826biological_processiron ion transport
A0006879biological_processintracellular iron ion homeostasis
A0006955biological_processimmune response
A0008198molecular_functionferrous iron binding
A0008199molecular_functionferric iron binding
A0008285biological_processnegative regulation of cell population proliferation
A0016491molecular_functionoxidoreductase activity
A0031410cellular_componentcytoplasmic vesicle
A0042802molecular_functionidentical protein binding
A0044754cellular_componentautolysosome
A0046872molecular_functionmetal ion binding
A0048147biological_processnegative regulation of fibroblast proliferation
A0070062cellular_componentextracellular exosome
A0070288cellular_componentferritin complex
A0110076biological_processnegative regulation of ferroptosis
A0140315molecular_functioniron ion sequestering activity
A1904724cellular_componenttertiary granule lumen
A1904813cellular_componentficolin-1-rich granule lumen
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue ZN A 201
ChainResidue
AGLU27
AGLU62
AHIS65
AZN208
AHOH306
AHOH371

site_idAC2
Number of Residues2
Detailsbinding site for residue ZN A 202
ChainResidue
AHIS105
AHOH444

site_idAC3
Number of Residues6
Detailsbinding site for residue ZN A 203
ChainResidue
AHIS122
AHIS122
AHOH520
AHOH520
AHOH520
AHIS122

site_idAC4
Number of Residues9
Detailsbinding site for residue ZN A 204
ChainResidue
AASP131
AASP131
AASP131
AGLU134
AGLU134
AGLU134
AHOH308
AHOH308
AHOH308

site_idAC5
Number of Residues8
Detailsbinding site for residue ZN A 205
ChainResidue
AHIS173
AHIS173
AHIS173
AHIS173
AZN206
AZN206
AZN206
AZN206

site_idAC6
Number of Residues8
Detailsbinding site for residue ZN A 206
ChainResidue
AHIS173
AHIS173
AHIS173
AHIS173
AZN205
AZN205
AZN205
AZN205

site_idAC7
Number of Residues6
Detailsbinding site for residue ZN A 207
ChainResidue
AASP84
AASP84
AGLN86
AGLN86
AHOH410
AHOH410

site_idAC8
Number of Residues7
Detailsbinding site for residue ZN A 208
ChainResidue
AGLU62
AGLU107
AGLN141
AZN201
AZN209
AHOH371
AHOH430

site_idAC9
Number of Residues6
Detailsbinding site for residue ZN A 209
ChainResidue
AGLN58
AGLU62
AGLU107
AZN208
AHOH430
AHOH440

Functional Information from PROSITE/UniProt
site_idPS00204
Number of Residues21
DetailsFERRITIN_2 Ferritin iron-binding regions signature 2. DphLADFIEthYLneqvkaIK
ChainResidueDetails
AASP126-LYS146

site_idPS00540
Number of Residues19
DetailsFERRITIN_1 Ferritin iron-binding regions signature 1. EeREhaEKLMklQNqRgGR
ChainResidueDetails
AGLU61-ARG79

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues149
DetailsDomain: {"description":"Ferritin-like diiron","evidences":[{"source":"PROSITE-ProRule","id":"PRU00085","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"1992356","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1FHA","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00085","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsSite: {"description":"Essential for association with cargo receptor NCOA4","evidences":[{"source":"PubMed","id":"26436293","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

239149

PDB entries from 2025-07-23

PDB statisticsPDBj update infoContact PDBjnumon