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5CKR

Crystal Structure of MraY in complex with Muraymycin D2

Functional Information from GO Data
ChainGOidnamespacecontents
A0005886cellular_componentplasma membrane
A0008360biological_processregulation of cell shape
A0008963molecular_functionphospho-N-acetylmuramoyl-pentapeptide-transferase activity
A0009252biological_processpeptidoglycan biosynthetic process
A0016020cellular_componentmembrane
A0016740molecular_functiontransferase activity
A0016780molecular_functionphosphotransferase activity, for other substituted phosphate groups
A0042802molecular_functionidentical protein binding
A0044038biological_processcell wall macromolecule biosynthetic process
A0046872molecular_functionmetal ion binding
A0051301biological_processcell division
A0051992molecular_functionUDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity
A0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue 57M A 401
ChainResidue
ALYS70
AMET263
AGLY264
AASP265
ASER268
AVAL302
AGLN305
AARG320
AALA321
APRO322
AHIS325
ATHR75
AHOH503
AASN190
AASP193
AGLY194
ALEU195
AASP196
AASN255
APHE262

Functional Information from PROSITE/UniProt
site_idPS01347
Number of Residues13
DetailsMRAY_1 MraY family signature 1. KkyTPTMGGIvIL
ChainResidueDetails
ALYS70-LEU82

site_idPS01348
Number of Residues12
DetailsMRAY_2 MraY family signature 2. NavNlTDGLDGL
ChainResidueDetails
AASN187-LEU198

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues22
DetailsTransmembrane: {"description":"Helical; Name=Helix 1","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues17
DetailsTransmembrane: {"description":"Helical; Name=Helix 2","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues44
DetailsTopological domain: {"description":"Periplasmic","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues21
DetailsTransmembrane: {"description":"Helical; Name=Helix 3","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues40
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues21
DetailsTransmembrane: {"description":"Helical; Name=Helix 4","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues21
DetailsTransmembrane: {"description":"Helical; Name=Helix 5","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues20
DetailsTransmembrane: {"description":"Helical; Name=Helix 6","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues21
DetailsTransmembrane: {"description":"Helical; Name=Helix 7","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues15
DetailsTransmembrane: {"description":"Helical; Name=Helix 8","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues25
DetailsTransmembrane: {"description":"Helical; Name=Helix 9","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues22
DetailsTransmembrane: {"description":"Helical; Name=Helix 10","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI13
Number of Residues9
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"27088606","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5CKR","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

238895

PDB entries from 2025-07-16

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