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5C8S

Crystal structure of the SARS coronavirus nsp14-nsp10 complex with functional ligands SAH and GpppA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0008270molecular_functionzinc ion binding
A0019079biological_processviral genome replication
B0000175molecular_function3'-5'-RNA exonuclease activity
B0004482molecular_functionmRNA 5'-cap (guanine-N7-)-methyltransferase activity
B0004532molecular_functionRNA exonuclease activity
B0008168molecular_functionmethyltransferase activity
C0003723molecular_functionRNA binding
C0008270molecular_functionzinc ion binding
C0019079biological_processviral genome replication
D0000175molecular_function3'-5'-RNA exonuclease activity
D0004482molecular_functionmRNA 5'-cap (guanine-N7-)-methyltransferase activity
D0004532molecular_functionRNA exonuclease activity
D0008168molecular_functionmethyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 201
ChainResidue
ACYS74
ACYS77
AHIS83
ACYS90

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 202
ChainResidue
ACYS117
ACYS120
ACYS128
ACYS130

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN B 601
ChainResidue
BCYS210
BCYS226
BHIS229
BCYS207

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN B 602
ChainResidue
BHIS257
BCYS261
BHIS264
BCYS279

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN B 603
ChainResidue
BCYS452
BCYS477
BCYS484
BHIS487

site_idAC6
Number of Residues3
Detailsbinding site for residue MG B 604
ChainResidue
BASP90
BALA187
BGLU191

site_idAC7
Number of Residues13
Detailsbinding site for residue SAH B 605
ChainResidue
BGLY333
BASN334
BPRO335
BASP352
BALA353
BGLN354
BLEU366
BPHE367
BTYR368
BTRP385
BASN386
BVAL389
BG3A606

site_idAC8
Number of Residues16
Detailsbinding site for residue G3A B 606
ChainResidue
BASN306
BCYS309
BARG310
BGLN313
BLYS336
BILE338
BTRP385
BASN386
BASN388
BPHE401
BTYR420
BASN422
BPHE426
BTHR428
BPHE506
BSAH605

site_idAC9
Number of Residues4
Detailsbinding site for residue ZN C 201
ChainResidue
CCYS74
CCYS77
CHIS83
CCYS90

site_idAD1
Number of Residues5
Detailsbinding site for residue ZN C 202
ChainResidue
CCYS117
CVAL119
CCYS120
CCYS128
CCYS130

site_idAD2
Number of Residues4
Detailsbinding site for residue ZN D 601
ChainResidue
DCYS207
DCYS210
DCYS226
DHIS229

site_idAD3
Number of Residues4
Detailsbinding site for residue ZN D 602
ChainResidue
DHIS257
DCYS261
DHIS264
DCYS279

site_idAD4
Number of Residues4
Detailsbinding site for residue ZN D 603
ChainResidue
DCYS452
DCYS477
DCYS484
DHIS487

site_idAD5
Number of Residues2
Detailsbinding site for residue MG D 604
ChainResidue
DASP90
DGLU191

site_idAD6
Number of Residues13
Detailsbinding site for residue SAH D 605
ChainResidue
DTRP292
DGLY333
DPRO335
DASP352
DALA353
DGLN354
DLEU366
DPHE367
DTYR368
DTRP385
DASN386
DASN388
DG3A606

site_idAD7
Number of Residues16
Detailsbinding site for residue G3A D 606
ChainResidue
DLYS423
DPHE426
DTHR428
DPHE506
DSAH605
BGLU364
BGLU365
DASN306
DCYS309
DARG310
DLYS336
DILE338
DTRP385
DASN386
DPHE401
DTYR420

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01298
ChainResidueDetails
BASP90
DASP273
BGLU92
BGLU191
BHIS268
BASP273
DASP90
DGLU92
DGLU191
DHIS268

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P0DTD1
ChainResidueDetails
BGLU92
CCYS77
CHIS83
CCYS90
CCYS117
CCYS120
CCYS128
CCYS130
BGLU191
BHIS268
BASP273
DGLU92
DGLU191
DHIS268
DASP273
CCYS74

site_idSWS_FT_FI3
Number of Residues16
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU01298
ChainResidueDetails
BCYS207
DCYS210
DCYS226
DHIS229
DHIS257
DCYS261
DHIS264
DCYS279
BCYS210
BCYS226
BHIS229
BHIS257
BCYS261
BHIS264
BCYS279
DCYS207

site_idSWS_FT_FI4
Number of Residues10
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU01299
ChainResidueDetails
BASP331
DHIS487
BCYS452
BCYS473
BCYS484
BHIS487
DASP331
DCYS452
DCYS473
DCYS484

site_idSWS_FT_FI5
Number of Residues2
DetailsSITE: Cleavage; by 3CL-PRO => ECO:0000269|PubMed:14561748
ChainResidueDetails
BGLN527
DGLN527

Catalytic Information from CSA
site_idMCSA1
Number of Residues
DetailsM-CSA 830
ChainResidueDetails

site_idMCSA2
Number of Residues
DetailsM-CSA 830
ChainResidueDetails

222624

PDB entries from 2024-07-17

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