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5C5Y

Crystal structure of deoxyribose-phosphate aldolase from Colwellia psychrerythraea (hexagonal form)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004139molecular_functiondeoxyribose-phosphate aldolase activity
A0005737cellular_componentcytoplasm
A0009264biological_processdeoxyribonucleotide catabolic process
A0016052biological_processcarbohydrate catabolic process
A0016829molecular_functionlyase activity
B0003824molecular_functioncatalytic activity
B0004139molecular_functiondeoxyribose-phosphate aldolase activity
B0005737cellular_componentcytoplasm
B0009264biological_processdeoxyribonucleotide catabolic process
B0016052biological_processcarbohydrate catabolic process
B0016829molecular_functionlyase activity
C0003824molecular_functioncatalytic activity
C0004139molecular_functiondeoxyribose-phosphate aldolase activity
C0005737cellular_componentcytoplasm
C0009264biological_processdeoxyribonucleotide catabolic process
C0016052biological_processcarbohydrate catabolic process
C0016829molecular_functionlyase activity
D0003824molecular_functioncatalytic activity
D0004139molecular_functiondeoxyribose-phosphate aldolase activity
D0005737cellular_componentcytoplasm
D0009264biological_processdeoxyribonucleotide catabolic process
D0016052biological_processcarbohydrate catabolic process
D0016829molecular_functionlyase activity
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue GOL A 302
ChainResidue
AASN132
DASN132

site_idAC2
Number of Residues4
Detailsbinding site for residue GOL A 303
ChainResidue
ALYS126
AASP163
AALA194
AHOH441

site_idAC3
Number of Residues7
Detailsbinding site for residue GOL B 302
ChainResidue
BASP163
BASN192
BALA194
BHOH435
BLYS126
BGLY161
BALA162

site_idAC4
Number of Residues4
Detailsbinding site for residue GOL D 302
ChainResidue
DLYS126
DGLY161
DASP163
DASN192

site_idAC5
Number of Residues9
Detailsbinding site for residue LYS B 166
ChainResidue
BASP102
BVAL137
BILE138
BILE139
BILE165
BTHR167
BSER168
BLYS198
BALA200

site_idAC6
Number of Residues9
Detailsbinding site for residue LYS C 166
ChainResidue
CASP102
CVAL137
CILE138
CILE139
CILE165
CTHR167
CSER168
CLYS198
CALA200

site_idAC7
Number of Residues9
Detailsbinding site for residue LYS D 166
ChainResidue
DASP102
DVAL137
DILE138
DILE139
DILE165
DTHR167
DSER168
DLYS198
DALA200

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PDB entries from 2024-08-07

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