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5B4B

Crystal structure of LpxH with lipid X in spacegroup C2

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005886cellular_componentplasma membrane
A0006629biological_processlipid metabolic process
A0008758molecular_functionUDP-2,3-diacylglucosamine hydrolase activity
A0009245biological_processlipid A biosynthetic process
A0016020cellular_componentmembrane
A0016462molecular_functionpyrophosphatase activity
A0016787molecular_functionhydrolase activity
A0019897cellular_componentextrinsic component of plasma membrane
A0030145molecular_functionmanganese ion binding
A0046872molecular_functionmetal ion binding
A0051861molecular_functionglycolipid binding
B0005737cellular_componentcytoplasm
B0005886cellular_componentplasma membrane
B0006629biological_processlipid metabolic process
B0008758molecular_functionUDP-2,3-diacylglucosamine hydrolase activity
B0009245biological_processlipid A biosynthetic process
B0016020cellular_componentmembrane
B0016462molecular_functionpyrophosphatase activity
B0016787molecular_functionhydrolase activity
B0019897cellular_componentextrinsic component of plasma membrane
B0030145molecular_functionmanganese ion binding
B0046872molecular_functionmetal ion binding
B0051861molecular_functionglycolipid binding
Functional Information from PDB Data
site_idAC1
Number of Residues22
Detailsbinding site for residue LP5 A 301
ChainResidue
AALA45
ASER160
AGLN163
ATHR164
ALYS167
AHIS195
AHOH401
AHOH402
AHOH404
AHOH405
AHOH421
ATRP46
AHOH455
AHOH541
BTRP139
AASN79
AARG80
AASP122
AALA124
ATYR125
ALEU156
AARG157

site_idAC2
Number of Residues7
Detailsbinding site for residue GOL A 302
ChainResidue
AASP50
AARG121
AASP170
AASP173
AVAL174
AHOH448
AHOH473

site_idAC3
Number of Residues19
Detailsbinding site for residue LP5 B 301
ChainResidue
ALEU136
BTRP46
BASN79
BARG80
BASP122
BALA124
BTYR125
BARG149
BSER160
BGLN163
BTHR164
BLYS167
BHIS195
BHOH404
BHOH406
BHOH413
BHOH442
BHOH472
BHOH481

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"27609419","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5B49","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"27609419","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5B4C","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues26
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"27609419","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"5B4B","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

239492

PDB entries from 2025-07-30

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