5B4B
Crystal structure of LpxH with lipid X in spacegroup C2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-12-10 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 143.534, 42.484, 100.756 |
Unit cell angles | 90.00, 125.12, 90.00 |
Refinement procedure
Resolution | 49.780 - 1.600 |
R-factor | 0.16241 |
Rwork | 0.161 |
R-free | 0.19008 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5b49 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.451 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.660 |
High resolution limit [Å] | 1.600 | 1.600 |
Number of reflections | 65538 | |
<I/σ(I)> | 18.3 | 1.97 |
Completeness [%] | 99.0 | 97 |
Redundancy | 5 | 4.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 131mM DL-Malic acid pH7.0, 17.5% PEG 3350, 10% (v/v) glycerol |