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5B4A

Crystal structure of LpxH with lipid X in spacegroup P21

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005886cellular_componentplasma membrane
A0006629biological_processlipid metabolic process
A0008758molecular_functionUDP-2,3-diacylglucosamine hydrolase activity
A0009245biological_processlipid A biosynthetic process
A0016020cellular_componentmembrane
A0016462molecular_functionpyrophosphatase activity
A0016787molecular_functionhydrolase activity
A0019897cellular_componentextrinsic component of plasma membrane
A0030145molecular_functionmanganese ion binding
A0046872molecular_functionmetal ion binding
A0051861molecular_functionglycolipid binding
B0005737cellular_componentcytoplasm
B0005886cellular_componentplasma membrane
B0006629biological_processlipid metabolic process
B0008758molecular_functionUDP-2,3-diacylglucosamine hydrolase activity
B0009245biological_processlipid A biosynthetic process
B0016020cellular_componentmembrane
B0016462molecular_functionpyrophosphatase activity
B0016787molecular_functionhydrolase activity
B0019897cellular_componentextrinsic component of plasma membrane
B0030145molecular_functionmanganese ion binding
B0046872molecular_functionmetal ion binding
B0051861molecular_functionglycolipid binding
Functional Information from PDB Data
site_idAC1
Number of Residues18
Detailsbinding site for residue LP5 A 301
ChainResidue
AASN79
ATHR164
ALYS167
AHIS195
AHOH417
AHOH422
AHOH434
AHOH478
AHOH542
BHIS246
AARG80
ALEU83
AASP122
AALA124
ATYR125
AARG149
AARG157
ASER160

site_idAC2
Number of Residues7
Detailsbinding site for residue GOL A 302
ChainResidue
AGLU44
AHIS150
AALA153
AARG157
AHOH403
AHOH513
AHOH559

site_idAC3
Number of Residues22
Detailsbinding site for residue LP5 B 301
ChainResidue
BTRP46
BASN79
BARG80
BGLY107
BASP122
BALA124
BTYR125
BLEU141
BLEU156
BARG157
BSER160
BTHR164
BLYS167
BHIS195
BHOH410
BHOH420
BHOH460
BHOH477
BHOH502
BHOH513
BHOH520
BHOH539

site_idAC4
Number of Residues8
Detailsbinding site for residue GOL B 302
ChainResidue
BHIS10
BARG80
BARG157
BASP218
BASP220
BHOH407
BHOH410
BHOH485

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:27609419, ECO:0007744|PDB:5B49
ChainResidueDetails
AASP8
AHIS10
AHIS197
BASP8
BHIS10
BHIS197

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:27609419, ECO:0007744|PDB:5B4C
ChainResidueDetails
AASP41
AASN79
AHIS114
BASP41
BASN79
BHIS114

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING: BINDING => ECO:0000305|PubMed:27609419, ECO:0007744|PDB:5B4B
ChainResidueDetails
AASP122
AARG157
AHIS195
BASP122
BARG157
BHIS195

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PDB entries from 2024-04-24

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