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5AZG

Crystal structure of LGG-1 complexed with a UNC-51 peptide

Functional Information from GO Data
ChainGOidnamespacecontents
A0000045biological_processautophagosome assembly
A0000407cellular_componentphagophore assembly site
A0000421cellular_componentautophagosome membrane
A0000422biological_processautophagy of mitochondrion
A0001778biological_processplasma membrane repair
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005741cellular_componentmitochondrial outer membrane
A0005764cellular_componentlysosome
A0005776cellular_componentautophagosome
A0005886cellular_componentplasma membrane
A0006914biological_processautophagy
A0006995biological_processcellular response to nitrogen starvation
A0008340biological_processdetermination of adult lifespan
A0008429molecular_functionphosphatidylethanolamine binding
A0009408biological_processresponse to heat
A0012501biological_processprogrammed cell death
A0016236biological_processmacroautophagy
A0030425cellular_componentdendrite
A0030670cellular_componentphagocytic vesicle membrane
A0031410cellular_componentcytoplasmic vesicle
A0031625molecular_functionubiquitin protein ligase binding
A0040024biological_processdauer larval development
A0042995cellular_componentcell projection
A0043005cellular_componentneuron projection
A0043025cellular_componentneuronal cell body
A0043202cellular_componentlysosomal lumen
A0043204cellular_componentperikaryon
A0050811molecular_functionGABA receptor binding
A0050830biological_processdefense response to Gram-positive bacterium
A0070266biological_processnecroptotic process
A0097237biological_processcellular response to toxic substance
A0097352biological_processautophagosome maturation
A0098792biological_processxenophagy
A2000786biological_processpositive regulation of autophagosome assembly
B0000045biological_processautophagosome assembly
B0000407cellular_componentphagophore assembly site
B0000421cellular_componentautophagosome membrane
B0000422biological_processautophagy of mitochondrion
B0001778biological_processplasma membrane repair
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005739cellular_componentmitochondrion
B0005741cellular_componentmitochondrial outer membrane
B0005764cellular_componentlysosome
B0005776cellular_componentautophagosome
B0005886cellular_componentplasma membrane
B0006914biological_processautophagy
B0006995biological_processcellular response to nitrogen starvation
B0008340biological_processdetermination of adult lifespan
B0008429molecular_functionphosphatidylethanolamine binding
B0009408biological_processresponse to heat
B0012501biological_processprogrammed cell death
B0016236biological_processmacroautophagy
B0030425cellular_componentdendrite
B0030670cellular_componentphagocytic vesicle membrane
B0031410cellular_componentcytoplasmic vesicle
B0031625molecular_functionubiquitin protein ligase binding
B0040024biological_processdauer larval development
B0042995cellular_componentcell projection
B0043005cellular_componentneuron projection
B0043025cellular_componentneuronal cell body
B0043202cellular_componentlysosomal lumen
B0043204cellular_componentperikaryon
B0050811molecular_functionGABA receptor binding
B0050830biological_processdefense response to Gram-positive bacterium
B0070266biological_processnecroptotic process
B0097237biological_processcellular response to toxic substance
B0097352biological_processautophagosome maturation
B0098792biological_processxenophagy
B2000786biological_processpositive regulation of autophagosome assembly
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue CD A 201
ChainResidue
AHIS0
AGLY116
BGLY-2
BHOH313

site_idAC2
Number of Residues1
Detailsbinding site for residue CD A 202
ChainResidue
AGLU17

site_idAC3
Number of Residues5
Detailsbinding site for residue CD A 203
ChainResidue
BHOH351
AASP45
AHOH301
BHIS42
BHOH320

site_idAC4
Number of Residues5
Detailsbinding site for residue CD A 204
ChainResidue
AASP97
AHOH328
BASP19
BHOH333
BHOH345

site_idAC5
Number of Residues6
Detailsbinding site for residue CD A 205
ChainResidue
AHIS98
AHOH310
AHOH336
AHOH338
AHOH339
AHOH341

site_idAC6
Number of Residues5
Detailsbinding site for residue CD A 206
ChainResidue
AASP27
BASP54
BHOH327
BHOH335
BHOH344

site_idAC7
Number of Residues4
Detailsbinding site for residue CD A 207
ChainResidue
AHOH303
BHOH324
BHOH337
BHOH346

site_idAC8
Number of Residues4
Detailsbinding site for residue CD A 208
ChainResidue
AASP54
BASP27
BHOH331
BHOH343

site_idAC9
Number of Residues4
Detailsbinding site for residue CD B 201
ChainResidue
AGLY-2
BHIS0
BGLY116
BHOH313

site_idAD1
Number of Residues6
Detailsbinding site for residue CD B 202
ChainResidue
AHIS99
AHOH311
AHOH335
BHIS99
BHOH340
BHOH347

site_idAD2
Number of Residues2
Detailsbinding site for residue CD B 203
ChainResidue
BGLU17
DHOH406

site_idAD3
Number of Residues1
Detailsbinding site for residue CD B 204
ChainResidue
BASP111

site_idAD4
Number of Residues6
Detailsbinding site for residue CD B 205
ChainResidue
BHIS98
BHOH302
BHOH311
BHOH338
BHOH349
BHOH354

site_idAD5
Number of Residues6
Detailsbinding site for residue CD B 206
ChainResidue
AHIS42
AGLN69
AHOH302
AHOH340
BASP45
BHOH321

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsSITE: Required for interaction with lgg-1 => ECO:0000269|PubMed:26687600
ChainResidueDetails
CASP357
DASP357
APHE104
BTYR25
BLEU50
BPHE104

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Required for interaction with sqst-1 => ECO:0000269|PubMed:26687600
ChainResidueDetails
AARG28
BARG28

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Cleavage => ECO:0000269|PubMed:22767594, ECO:0000305|PubMed:20550938, ECO:0000305|PubMed:21802374
ChainResidueDetails
AGLY116
BGLY116

site_idSWS_FT_FI4
Number of Residues2
DetailsLIPID: Phosphatidylethanolamine amidated glycine => ECO:0000269|PubMed:22767594, ECO:0000305|PubMed:20550938, ECO:0000305|PubMed:21802374
ChainResidueDetails
AGLY116
BGLY116

223166

PDB entries from 2024-07-31

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