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5AXN

Crystal structure of Thg1 like protein (TLP) with tRNA(Phe) and GDPNP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0005525molecular_functionGTP binding
A0006400biological_processtRNA modification
A0008033biological_processtRNA processing
A0008193molecular_functiontRNA guanylyltransferase activity
A0046872molecular_functionmetal ion binding
A0099116biological_processtRNA 5'-end processing
B0000287molecular_functionmagnesium ion binding
B0005525molecular_functionGTP binding
B0006400biological_processtRNA modification
B0008033biological_processtRNA processing
B0008193molecular_functiontRNA guanylyltransferase activity
B0046872molecular_functionmetal ion binding
B0099116biological_processtRNA 5'-end processing
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 301
ChainResidue
AASP21
AASP69
AMG302
AGNP304
PGTP2

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 302
ChainResidue
PGTP2
AASP21
AGLY22
AASP69
AMG301

site_idAC3
Number of Residues5
Detailsbinding site for residue MG A 303
ChainResidue
AGNP304
AHOH401
AHOH406
BLYS86
PHOH102

site_idAC4
Number of Residues11
Detailsbinding site for residue GNP A 304
ChainResidue
AARG19
AARG114
AGLU133
AMG301
AMG303
AHOH401
AHOH404
BARG83
BLYS86
PGTP2
PC72

site_idAC5
Number of Residues15
Detailsbinding site for residue GNP B 301
ChainResidue
BASP21
BGLY22
BARG23
BASN24
BPHE25
BLYS26
BGLU35
BPRO37
BASP39
BPHE42
BSER68
BASP69
BMG302
BMG303
BHOH403

site_idAC6
Number of Residues4
Detailsbinding site for residue MG B 302
ChainResidue
BASP21
BGLY22
BASP69
BGNP301

site_idAC7
Number of Residues3
Detailsbinding site for residue MG B 303
ChainResidue
BASP21
BGNP301
BHOH403

site_idAC8
Number of Residues17
Detailsbinding site for Di-nucleotide GTP P 2 and G P 3
ChainResidue
AASP21
AGLY22
AASN24
APHE25
ALYS26
AASP69
ATYR144
AALA158
AMG301
AMG302
AGNP304
AHOH405
PG4
PC70
PC71
PHOH101
PHOH102

226707

PDB entries from 2024-10-30

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