5AWZ

Crystal Structure of the Cell-Free Synthesized Membrane Protein, Acetabularia Rhodopsin I, at 1.57 angstrom

Replaces:  3WT8
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Functional Information from GO Data

ChainGOidnamespacecontents
A0016021cellular_componentintegral component of membrane
A0005216molecular_functionion channel activity
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Functional Information from PDB Data

site_idNumber of ResiduesDetails
AC19binding site for residue RET A 301
ChainResidue
ATRP90
ATHR94
AMET122
AGLY144
ATRP185
ATYR188
APRO189
AASP214
ALYS218

AC28binding site for residue OLB A 302
ChainResidue
ATHR57
AALA58
AASN65
ALYS70
ATYR84
AALA85
AILE88
AHOH446

AC33binding site for residue D12 A 303
ChainResidue
ATRP138
APHE141
ACYS145

AC41binding site for residue D12 A 304
ChainResidue
AVAL186

AC52binding site for residue D10 A 305
ChainResidue
AILE156
AOCT309

AC63binding site for residue D10 A 306
ChainResidue
AGLN35
APHE36
ATRP114

AC73binding site for residue OCT A 309
ChainResidue
APHE36
AARG37
AD10305

AC82binding site for residue C14 A 310
ChainResidue
ACYS145
AGLY193

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Functional Information from PDB atom coordinates for the "HETATM" binding sites

site_idNumber of ResiduesDetails
D10_5awz_A_3077DECANE binding site
ChainResidueligand
AVAL22D10: DECANE
AILE212D10: DECANE
ALEU215-LEU216D10: DECANE
APRO219-LEU220D10: DECANE
AILE223D10: DECANE

D10_5awz_A_3063DECANE binding site
ChainResidueligand
AILE32D10: DECANE
AGLN35-PHE36D10: DECANE

OLB_5awz_A_30214(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate binding site
ChainResidueligand
AILE54OLB: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
ATHR57-ALA58OLB: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
AALA61-MET62OLB: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
AASN65OLB: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
AASP68OLB: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
ALYS70-PRO71OLB: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
ATYR84-ALA85OLB: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
AILE88-ASP89OLB: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
APHE92OLB: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate

RET_5awz_A_30121RETINAL binding site
ChainResidueligand
ATYR87RET: RETINAL
AASP89-TRP90RET: RETINAL
ATHR93-THR94RET: RETINAL
ALEU97RET: RETINAL
AMET122-ILE123RET: RETINAL
APHE125-GLY126RET: RETINAL
APHE141RET: RETINAL
AGLY144-CYS145RET: RETINAL
ALEU148RET: RETINAL
ATRP185RET: RETINAL
ATYR188-PRO189RET: RETINAL
ATRP192RET: RETINAL
AASP214RET: RETINAL
AALA217-LYS218RET: RETINAL

OCT_5awz_A_3086N-OCTANE binding site
ChainResidueligand
AVAL91-PHE92OCT: N-OCTANE
APRO95-LEU96OCT: N-OCTANE
ALEU99OCT: N-OCTANE
AILE120OCT: N-OCTANE

D12_5awz_A_3036DODECANE binding site
ChainResidueligand
ATRP138D12: DODECANE
APHE141-VAL142D12: DODECANE
ACYS145-ILE146D12: DODECANE
AALA149D12: DODECANE

C14_5awz_A_31011TETRADECANE binding site
ChainResidueligand
ATRP138C14: TETRADECANE
APHE141C14: TETRADECANE
ACYS145C14: TETRADECANE
ALEU148-ALA149C14: TETRADECANE
AVAL186C14: TETRADECANE
APRO189-ILE190C14: TETRADECANE
AGLY193-LEU194C14: TETRADECANE
AILE200C14: TETRADECANE

D10_5awz_A_3055DECANE binding site
ChainResidueligand
AALA149D10: DECANE
AALA152-TRP153D10: DECANE
AILE156D10: DECANE
AILE182D10: DECANE

OCT_5awz_A_3091N-OCTANE binding site
ChainResidueligand
ATRP153OCT: N-OCTANE

D12_5awz_A_3048DODECANE binding site
ChainResidueligand
AVAL183-LEU184D12: DODECANE
AILE187D12: DODECANE
AILE208-ALA209D12: DODECANE
AILE212-LEU213D12: DODECANE
ALEU216D12: DODECANE

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Functional Information from PROSITE/UniProt

site_idNumber of ResiduesDetails
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Functional Information from SwissProt/UniProt

site_idNumber of ResiduesDetails
SWS_FT_FI1158Helical. {ECO:0000256|SAM:Phobius}.
ChainResidueDetails
AALA22-PHE43
ALEU50-ALA70
AILE90-LEU111
AMET118-THR139
ATRP145-ILE163
ALEU184-ILE208
AILE214-TYR240

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Catalytic Information from CSA

site_idNumber of ResiduesDetails
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