Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5ABF

Structure of GH84 with ligand

Functional Information from GO Data
ChainGOidnamespacecontents
A0005975biological_processcarbohydrate metabolic process
A0006517biological_processprotein deglycosylation
A0008152biological_processmetabolic process
A0009100biological_processglycoprotein metabolic process
A0016231molecular_functionbeta-N-acetylglucosaminidase activity
A0016787molecular_functionhydrolase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0042802molecular_functionidentical protein binding
A0102166molecular_functionobsolete [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-threonine O-N-acetyl-alpha-D-glucosaminase activity
A0102167molecular_functionobsolete [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine O-N-acetyl-alpha-D-glucosaminase activity
A0102571molecular_function[protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity
A1901135biological_processcarbohydrate derivative metabolic process
B0005975biological_processcarbohydrate metabolic process
B0006517biological_processprotein deglycosylation
B0008152biological_processmetabolic process
B0009100biological_processglycoprotein metabolic process
B0016231molecular_functionbeta-N-acetylglucosaminidase activity
B0016787molecular_functionhydrolase activity
B0016798molecular_functionhydrolase activity, acting on glycosyl bonds
B0042802molecular_functionidentical protein binding
B0102166molecular_functionobsolete [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-threonine O-N-acetyl-alpha-D-glucosaminase activity
B0102167molecular_functionobsolete [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine O-N-acetyl-alpha-D-glucosaminase activity
B0102571molecular_function[protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity
B1901135biological_processcarbohydrate derivative metabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 1715
ChainResidue
BGLU32
BGLU61
BASP64
BHOH2011
BHOH2012
BHOH2020

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 1716
ChainResidue
AASN546
AASN548
AHOH2098
AARG347
AGLU375
AHIS376

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 1716
ChainResidue
BARG347
BGLU375
BHIS376
BASN546
BASN548
BHOH2097
BHOH2101

site_idAC4
Number of Residues17
DetailsBINDING SITE FOR RESIDUE XRJ B 1717
ChainResidue
BGLY135
BPHE136
BTYR137
BLYS166
BASP242
BASP243
BCYS278
BTYR282
BTRP286
BTHR310
BVAL314
BTRP337
BASN339
BVAL342
BASP344
BTYR345
BASN372

site_idAC5
Number of Residues16
DetailsBINDING SITE FOR RESIDUE XRJ A 1717
ChainResidue
AGLY135
APHE136
ATYR137
ALYS166
AASP242
AASP243
ACYS278
ATYR282
ATRP286
ATHR310
ATRP337
AASN339
AVAL342
AASP344
AASN372
AHIS433

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000255|PROSITE-ProRule:PRU01353, ECO:0000269|PubMed:16565725
ChainResidueDetails
BASP243

site_idSWS_FT_FI2
Number of Residues7
DetailsBINDING: BINDING => ECO:0000269|PubMed:16565725
ChainResidueDetails
BGLY135
BLYS166
BASP242
BTYR282
BTRP337
BASP344
BASN372

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon