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5AA0

Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
Aa0003735molecular_functionstructural constituent of ribosome
Aa0005840cellular_componentribosome
Aa0006412biological_processtranslation
Aa0019843molecular_functionrRNA binding
Aa0046872molecular_functionmetal ion binding
Aa1990904cellular_componentribonucleoprotein complex
Ab0003735molecular_functionstructural constituent of ribosome
Ab0005840cellular_componentribosome
Ab0006412biological_processtranslation
Ab0015934cellular_componentlarge ribosomal subunit
Ab1990904cellular_componentribonucleoprotein complex
Ac0000049molecular_functiontRNA binding
Ac0003735molecular_functionstructural constituent of ribosome
Ac0005737cellular_componentcytoplasm
Ac0005840cellular_componentribosome
Ac0006412biological_processtranslation
Ac0019843molecular_functionrRNA binding
Ac0043229cellular_componentintracellular organelle
Ac1990904cellular_componentribonucleoprotein complex
AC0000049molecular_functiontRNA binding
AC0003723molecular_functionRNA binding
AC0003735molecular_functionstructural constituent of ribosome
AC0005840cellular_componentribosome
AC0006412biological_processtranslation
AC0006417biological_processregulation of translation
AC0015934cellular_componentlarge ribosomal subunit
AC0019843molecular_functionrRNA binding
AC1990904cellular_componentribonucleoprotein complex
Ad0003735molecular_functionstructural constituent of ribosome
Ad0005840cellular_componentribosome
Ad0006412biological_processtranslation
Ad1990904cellular_componentribonucleoprotein complex
AD0003723molecular_functionRNA binding
AD0003735molecular_functionstructural constituent of ribosome
AD0005840cellular_componentribosome
AD0006412biological_processtranslation
AD0015934cellular_componentlarge ribosomal subunit
AD0016740molecular_functiontransferase activity
AD0019843molecular_functionrRNA binding
AD1990904cellular_componentribonucleoprotein complex
Ae0003735molecular_functionstructural constituent of ribosome
Ae0005840cellular_componentribosome
Ae0006412biological_processtranslation
Ae1990904cellular_componentribonucleoprotein complex
AE0003735molecular_functionstructural constituent of ribosome
AE0005840cellular_componentribosome
AE0006412biological_processtranslation
AE0019843molecular_functionrRNA binding
AE1990904cellular_componentribonucleoprotein complex
Af0003735molecular_functionstructural constituent of ribosome
Af0005737cellular_componentcytoplasm
Af0005840cellular_componentribosome
Af0006412biological_processtranslation
Af0043229cellular_componentintracellular organelle
Af0046872molecular_functionmetal ion binding
Af1990904cellular_componentribonucleoprotein complex
AF0003735molecular_functionstructural constituent of ribosome
AF0005840cellular_componentribosome
AF0006412biological_processtranslation
AF0019843molecular_functionrRNA binding
AF1990904cellular_componentribonucleoprotein complex
AG0000049molecular_functiontRNA binding
AG0003735molecular_functionstructural constituent of ribosome
AG0005840cellular_componentribosome
AG0006412biological_processtranslation
AG0019843molecular_functionrRNA binding
AG1990904cellular_componentribonucleoprotein complex
AH0003735molecular_functionstructural constituent of ribosome
AH0005840cellular_componentribosome
AH0006412biological_processtranslation
AH0019843molecular_functionrRNA binding
AH1990904cellular_componentribonucleoprotein complex
AJ0003735molecular_functionstructural constituent of ribosome
AJ0005840cellular_componentribosome
AJ0006412biological_processtranslation
AJ0019843molecular_functionrRNA binding
AJ0070180molecular_functionlarge ribosomal subunit rRNA binding
AJ1990904cellular_componentribonucleoprotein complex
AK0003729molecular_functionmRNA binding
AK0003735molecular_functionstructural constituent of ribosome
AK0005737cellular_componentcytoplasm
AK0005840cellular_componentribosome
AK0006412biological_processtranslation
AK0017148biological_processnegative regulation of translation
AK0022625cellular_componentcytosolic large ribosomal subunit
AK0043229cellular_componentintracellular organelle
AK1990904cellular_componentribonucleoprotein complex
AL0003735molecular_functionstructural constituent of ribosome
AL0005840cellular_componentribosome
AL0006412biological_processtranslation
AL0015934cellular_componentlarge ribosomal subunit
AL0019843molecular_functionrRNA binding
AL0022625cellular_componentcytosolic large ribosomal subunit
AL0070180molecular_functionlarge ribosomal subunit rRNA binding
AL1990904cellular_componentribonucleoprotein complex
AM0003735molecular_functionstructural constituent of ribosome
AM0005840cellular_componentribosome
AM0006412biological_processtranslation
AM0015934cellular_componentlarge ribosomal subunit
AM0019843molecular_functionrRNA binding
AM1990904cellular_componentribonucleoprotein complex
AN0000049molecular_functiontRNA binding
AN0003735molecular_functionstructural constituent of ribosome
AN0005840cellular_componentribosome
AN0006412biological_processtranslation
AN0019843molecular_functionrRNA binding
AN0022625cellular_componentcytosolic large ribosomal subunit
AN1990904cellular_componentribonucleoprotein complex
AO0003735molecular_functionstructural constituent of ribosome
AO0005840cellular_componentribosome
AO0006412biological_processtranslation
AO1990904cellular_componentribonucleoprotein complex
AP0003735molecular_functionstructural constituent of ribosome
AP0005737cellular_componentcytoplasm
AP0005840cellular_componentribosome
AP0006412biological_processtranslation
AP0008097molecular_function5S rRNA binding
AP0019843molecular_functionrRNA binding
AP0022625cellular_componentcytosolic large ribosomal subunit
AP0043229cellular_componentintracellular organelle
AP1990904cellular_componentribonucleoprotein complex
AQ0003735molecular_functionstructural constituent of ribosome
AQ0005840cellular_componentribosome
AQ0006412biological_processtranslation
AR0000027biological_processribosomal large subunit assembly
AR0003735molecular_functionstructural constituent of ribosome
AR0005840cellular_componentribosome
AR0006412biological_processtranslation
AR0019843molecular_functionrRNA binding
AR0022625cellular_componentcytosolic large ribosomal subunit
AR1990904cellular_componentribonucleoprotein complex
AS0003723molecular_functionRNA binding
AS0003735molecular_functionstructural constituent of ribosome
AS0005737cellular_componentcytoplasm
AS0005840cellular_componentribosome
AS0006412biological_processtranslation
AS0019843molecular_functionrRNA binding
AS0043229cellular_componentintracellular organelle
AS1990904cellular_componentribonucleoprotein complex
AT0003735molecular_functionstructural constituent of ribosome
AT0005840cellular_componentribosome
AT0006412biological_processtranslation
AT0015934cellular_componentlarge ribosomal subunit
AT0019843molecular_functionrRNA binding
AT1990904cellular_componentribonucleoprotein complex
AU0000027biological_processribosomal large subunit assembly
AU0003735molecular_functionstructural constituent of ribosome
AU0005840cellular_componentribosome
AU0006412biological_processtranslation
AU0019843molecular_functionrRNA binding
AU0022625cellular_componentcytosolic large ribosomal subunit
AU1990904cellular_componentribonucleoprotein complex
AV0003723molecular_functionRNA binding
AV0003735molecular_functionstructural constituent of ribosome
AV0005840cellular_componentribosome
AV0006412biological_processtranslation
AV0019843molecular_functionrRNA binding
AV1990904cellular_componentribonucleoprotein complex
AW0003735molecular_functionstructural constituent of ribosome
AW0005840cellular_componentribosome
AW0006412biological_processtranslation
AW0008097molecular_function5S rRNA binding
AX0003735molecular_functionstructural constituent of ribosome
AX0005840cellular_componentribosome
AX0006412biological_processtranslation
AX0022625cellular_componentcytosolic large ribosomal subunit
AX1990904cellular_componentribonucleoprotein complex
AY0003735molecular_functionstructural constituent of ribosome
AY0005840cellular_componentribosome
AY0006412biological_processtranslation
AY0022625cellular_componentcytosolic large ribosomal subunit
AY1990904cellular_componentribonucleoprotein complex
AZ0003735molecular_functionstructural constituent of ribosome
AZ0005840cellular_componentribosome
AZ0006412biological_processtranslation
AZ0015934cellular_componentlarge ribosomal subunit
AZ0022625cellular_componentcytosolic large ribosomal subunit
AZ1990904cellular_componentribonucleoprotein complex
BF0003735molecular_functionstructural constituent of ribosome
BF0005840cellular_componentribosome
BF0006412biological_processtranslation
BF0015935cellular_componentsmall ribosomal subunit
BF0019843molecular_functionrRNA binding
BF1990904cellular_componentribonucleoprotein complex
BG0003676molecular_functionnucleic acid binding
BG0003723molecular_functionRNA binding
BG0003735molecular_functionstructural constituent of ribosome
BG0006412biological_processtranslation
BH0003723molecular_functionRNA binding
BH0003735molecular_functionstructural constituent of ribosome
BH0005840cellular_componentribosome
BH0006412biological_processtranslation
BH0015935cellular_componentsmall ribosomal subunit
BH0019843molecular_functionrRNA binding
BH0046872molecular_functionmetal ion binding
BH1990904cellular_componentribonucleoprotein complex
BI0003723molecular_functionRNA binding
BI0003735molecular_functionstructural constituent of ribosome
BI0005737cellular_componentcytoplasm
BI0005840cellular_componentribosome
BI0006412biological_processtranslation
BI0015935cellular_componentsmall ribosomal subunit
BI0019843molecular_functionrRNA binding
BI0043229cellular_componentintracellular organelle
BI1990904cellular_componentribonucleoprotein complex
BJ0003735molecular_functionstructural constituent of ribosome
BJ0005737cellular_componentcytoplasm
BJ0005840cellular_componentribosome
BJ0006412biological_processtranslation
BJ0019843molecular_functionrRNA binding
BJ0043229cellular_componentintracellular organelle
BJ1990904cellular_componentribonucleoprotein complex
BK0000049molecular_functiontRNA binding
BK0003723molecular_functionRNA binding
BK0003735molecular_functionstructural constituent of ribosome
BK0005840cellular_componentribosome
BK0006412biological_processtranslation
BK0015935cellular_componentsmall ribosomal subunit
BK0019843molecular_functionrRNA binding
BK1990904cellular_componentribonucleoprotein complex
BL0003735molecular_functionstructural constituent of ribosome
BL0005737cellular_componentcytoplasm
BL0005840cellular_componentribosome
BL0006412biological_processtranslation
BL0019843molecular_functionrRNA binding
BL0043229cellular_componentintracellular organelle
BL1990904cellular_componentribonucleoprotein complex
BM0000049molecular_functiontRNA binding
BM0003735molecular_functionstructural constituent of ribosome
BM0005840cellular_componentribosome
BM0006412biological_processtranslation
BM0019843molecular_functionrRNA binding
BM0043229cellular_componentintracellular organelle
BM1990904cellular_componentribonucleoprotein complex
BN0000049molecular_functiontRNA binding
BN0003723molecular_functionRNA binding
BN0003735molecular_functionstructural constituent of ribosome
BN0005840cellular_componentribosome
BN0006412biological_processtranslation
BN0019843molecular_functionrRNA binding
BN1990904cellular_componentribonucleoprotein complex
BO0003735molecular_functionstructural constituent of ribosome
BO0005840cellular_componentribosome
BO0006412biological_processtranslation
BO0019843molecular_functionrRNA binding
BO1990904cellular_componentribonucleoprotein complex
BP0000049molecular_functiontRNA binding
BP0003735molecular_functionstructural constituent of ribosome
BP0005840cellular_componentribosome
BP0006412biological_processtranslation
BP0015935cellular_componentsmall ribosomal subunit
BP0019843molecular_functionrRNA binding
BP1990904cellular_componentribonucleoprotein complex
BQ0000049molecular_functiontRNA binding
BQ0003676molecular_functionnucleic acid binding
BQ0003723molecular_functionRNA binding
BQ0003735molecular_functionstructural constituent of ribosome
BQ0005829cellular_componentcytosol
BQ0005840cellular_componentribosome
BQ0006412biological_processtranslation
BQ0015935cellular_componentsmall ribosomal subunit
BQ0019843molecular_functionrRNA binding
BQ1990904cellular_componentribonucleoprotein complex
BR0003735molecular_functionstructural constituent of ribosome
BR0005737cellular_componentcytoplasm
BR0005840cellular_componentribosome
BR0006412biological_processtranslation
BR0008270molecular_functionzinc ion binding
BR0015935cellular_componentsmall ribosomal subunit
BR0019843molecular_functionrRNA binding
BR0043229cellular_componentintracellular organelle
BR0046872molecular_functionmetal ion binding
BR1990904cellular_componentribonucleoprotein complex
BS0003735molecular_functionstructural constituent of ribosome
BS0005737cellular_componentcytoplasm
BS0005840cellular_componentribosome
BS0006412biological_processtranslation
BS0019843molecular_functionrRNA binding
BS0022627cellular_componentcytosolic small ribosomal subunit
BS0043229cellular_componentintracellular organelle
BS1990904cellular_componentribonucleoprotein complex
BT0003735molecular_functionstructural constituent of ribosome
BT0005737cellular_componentcytoplasm
BT0005840cellular_componentribosome
BT0006412biological_processtranslation
BT0043229cellular_componentintracellular organelle
BT1990904cellular_componentribonucleoprotein complex
BU0003735molecular_functionstructural constituent of ribosome
BU0005840cellular_componentribosome
BU0006412biological_processtranslation
BU0019843molecular_functionrRNA binding
BU0022627cellular_componentcytosolic small ribosomal subunit
BU1990904cellular_componentribonucleoprotein complex
BV0003735molecular_functionstructural constituent of ribosome
BV0005840cellular_componentribosome
BV0006412biological_processtranslation
BW0003723molecular_functionRNA binding
BW0003735molecular_functionstructural constituent of ribosome
BW0005840cellular_componentribosome
BW0006412biological_processtranslation
BW0015935cellular_componentsmall ribosomal subunit
BX0003723molecular_functionRNA binding
BX0003735molecular_functionstructural constituent of ribosome
BX0005840cellular_componentribosome
BX0006412biological_processtranslation
BX0019843molecular_functionrRNA binding
BX1990904cellular_componentribonucleoprotein complex
BY0005840cellular_componentribosome
BZ0003924molecular_functionGTPase activity
BZ0005525molecular_functionGTP binding
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkevkrp.DGsairFddNaaVI
ChainResidueDetails
ALALA60-ILE86

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. DvLvtaFInkimrdGKKnlaarIFydA
ChainResidueDetails
BKASP20-ALA46

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GiaILSTSkGVLtdreAR
ChainResidueDetails
BLGLY108-ARG125

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrALqaS.GLqVksivDdTPvPHN
ChainResidueDetails
BOILE95-ASN117

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
BPLYS46-ARG53

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIiEsRPIS
ChainResidueDetails
BUGLY54-SER66

site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. RDYrn.VevLkrFLSEt.GKIlprRR
ChainResidueDetails
BVARG32-ARG55

site_idPS00063
Number of Residues16
DetailsALDOKETO_REDUCTASE_3 Aldo/keto reductase family putative active site signature. LAKTIKraRIlGLlPF
ChainResidueDetails
BVLEU66-PHE81

site_idPS00196
Number of Residues16
DetailsCOPPER_BLUE Type-1 copper (blue) proteins signature. GrvY.VICenPkHkqr.Q
ChainResidueDetails
AfGLY21-GLN36

site_idPS00301
Number of Residues16
DetailsG_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DSndlEKeRGITIlaK
ChainResidueDetails
BZASP44-LYS59

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGKqhvpvyItenmVGhkLGEFapT
ChainResidueDetails
BWASN53-THR77

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LalITGQkpAvTrAKkS
ChainResidueDetails
AGLEU60-SER76

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGksGQidAiklGiARAL
ChainResidueDetails
BMGLY67-LEU85

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. ArrsGAqvsGPIpLPT
ChainResidueDetails
BNALA27-THR42

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. LseHLkvhKkDhhShrgLlmMvgqrrrLlrY
ChainResidueDetails
BSLEU39-TYR69

site_idPS00430
Number of Residues46
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. pkhgkryrallekvdpnkiytideaahlvkelatakfd.............................................................................ETVEVHAK
ChainResidueDetails
ACPRO1-LYS46

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KrvLpRArGRadiikkrtSHITViL
ChainResidueDetails
ATLYS83-LEU107

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PhvRGAAmNPvD
ChainResidueDetails
ADPRO219-ASP230

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FkpgervDvtGtSkGRGfaGvmkR
ChainResidueDetails
AEPHE96-ARG119

site_idPS00475
Number of Residues30
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KILGeGeAkp...LkVvahaFSksAlekLkaaG
ChainResidueDetails
AMLYS113-GLY142

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. R.CvrcgrarsvyrfFGLCRiCLR
ChainResidueDetails
BRARG23-ARG45

site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewaaqGrVplHt..LranIDygfalarTtyGvlG
ChainResidueDetails
BGALA163-GLY197

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. QNHKIRdLKRQIARL
ChainResidueDetails
AYGLN41-LEU55

site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YaTeKNkrntPnkLElrKYC
ChainResidueDetails
AcTYR21-CYS40

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfrFgAlvVVGDrq.GrVGlGfgkap.EVpl.AV
ChainResidueDetails
BIGLY23-VAL55

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRlgfAvSrrqARqLV
ChainResidueDetails
BHLEU97-VAL121

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. ALkaLgLrRlqQeRvledtpairgNVekVahLV
ChainResidueDetails
AZALA22-VAL54

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ
ChainResidueDetails
BQARG88-GLN101

site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRrlfkrLkVYaG
ChainResidueDetails
AKVAL103-GLY125

site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTWQpnrrkRakth.GFraR
ChainResidueDetails
AdLYS2-ARG21

site_idPS00828
Number of Residues26
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CdkCkvIrRhgrVyViCenp.KHkQrQ
ChainResidueDetails
AfCYS11-GLN36

site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GnILvRQRGtrfkpG
ChainResidueDetails
AXGLY34-GLY48

site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTHkGAkKRVkitasgkvvamktgk.RH
ChainResidueDetails
AeLYS5-HIS31

site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KrdfRrLWIVRINaacR
ChainResidueDetails
ARLYS54-ARG70

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VkELLEAGVHFG
ChainResidueDetails
BFVAL7-GLY18

site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. IvQrGRAR.RAKLYFIR
ChainResidueDetails
AQILE88-ARG103

site_idPS01048
Number of Residues10
DetailsRIBOSOMAL_S6 Ribosomal protein S6 signature. GlRRLAYpIA
ChainResidueDetails
BJGLY44-ALA53

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. GDtVlVAsGkyKGrv.GkV
ChainResidueDetails
AVGLY10-VAL27

site_idPS01143
Number of Residues22
DetailsRIBOSOMAL_L31 Ribosomal protein L31 signature. EVcskcHPFYTgqqrfvdte....GR
ChainResidueDetails
AaGLU34-ARG55

site_idPS01199
Number of Residues20
DetailsRIBOSOMAL_L1 Ribosomal protein L1 signature. MgaVgskLGriLGPRGlLPN
ChainResidueDetails
ACMET120-ASN139

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00849
ChainResidueDetails
BZASP15
BZLYS129
BRCYS40
BRCYS43

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N6,N6,N6-trimethyllysine => ECO:0000250|UniProtKB:P0A7J7
ChainResidueDetails
AJLYS70

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PDB entries from 2024-07-24

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