5A8H

cryo-ET subtomogram averaging of BG505 SOSIP.664 in complex with sCD4, 17b, and 8ANC195

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0019031	cellular_component	viral envelope
B	0007155	biological_process	cell adhesion
B	0016020	cellular_component	membrane
G	0019031	cellular_component	viral envelope
H	0007155	biological_process	cell adhesion
H	0016020	cellular_component	membrane
M	0019031	cellular_component	viral envelope
N	0007155	biological_process	cell adhesion
N	0016020	cellular_component	membrane

Functional Information from PROSITE/UniProt

site_id	PS00290
Number of Residues	7
Details	IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH

Chain	Residue	Details
C	TYR192-HIS198
E	TYR192-HIS198
D	TYR194-HIS200
F	TYR194-HIS200

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	30
Details	Region: {"description":"CD4-binding loop","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	75
Details	Region: {"description":"V4","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI3
Number of Residues	30
Details	Region: {"description":"V5"}

Chain

Residue

Details

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site_id	SWS_FT_FI4
Number of Residues	24
Details	Region: {"description":"V5","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI5
Number of Residues	51
Details	Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI6
Number of Residues	297
Details	Domain: {"description":"Ig-like V-type"}

Chain

Residue

Details

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site_id	SWS_FT_FI7
Number of Residues	231
Details	Domain: {"description":"Ig-like C2-type 1"}

Chain

Residue

Details

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