5A0T
Catalysis and 5' end sensing by ribonuclease RNase J of the metallo- beta-lactamase family
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003723 | molecular_function | RNA binding |
| A | 0004518 | molecular_function | nuclease activity |
| A | 0004519 | molecular_function | endonuclease activity |
| A | 0004521 | molecular_function | RNA endonuclease activity |
| A | 0004527 | molecular_function | exonuclease activity |
| A | 0004532 | molecular_function | RNA exonuclease activity |
| A | 0004534 | molecular_function | 5'-3' RNA exonuclease activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006364 | biological_process | rRNA processing |
| A | 0006396 | biological_process | RNA processing |
| A | 0006397 | biological_process | mRNA processing |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0008409 | molecular_function | 5'-3' exonuclease activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0003723 | molecular_function | RNA binding |
| B | 0004518 | molecular_function | nuclease activity |
| B | 0004519 | molecular_function | endonuclease activity |
| B | 0004521 | molecular_function | RNA endonuclease activity |
| B | 0004527 | molecular_function | exonuclease activity |
| B | 0004532 | molecular_function | RNA exonuclease activity |
| B | 0004534 | molecular_function | 5'-3' RNA exonuclease activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006364 | biological_process | rRNA processing |
| B | 0006396 | biological_process | RNA processing |
| B | 0006397 | biological_process | mRNA processing |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0008409 | molecular_function | 5'-3' exonuclease activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PEG B 1453 |
| Chain | Residue |
| B | ASN223 |
| B | ARG226 |
| B | GLN227 |
| B | ASN231 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PEG A 1456 |
| Chain | Residue |
| A | ASN223 |
| A | ARG226 |
| A | GLN227 |
| A | ASN231 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE ZN A 1457 |
| Chain | Residue |
| A | HIS89 |
| A | ASP173 |
| A | HIS399 |
| A | ZN1458 |
| A | HOH2069 |
| E | G1 |
| A | ASP88 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE ZN A 1458 |
| Chain | Residue |
| A | HIS84 |
| A | HIS86 |
| A | HIS151 |
| A | ASP173 |
| A | ZN1457 |
| A | HOH2069 |
| E | G1 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE ZN B 1454 |
| Chain | Residue |
| B | ASP88 |
| B | HIS89 |
| B | ASP173 |
| B | HIS399 |
| B | ZN1455 |
| B | HOH2056 |
| F | G1 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE ZN B 1455 |
| Chain | Residue |
| B | HIS84 |
| B | HIS86 |
| B | HIS151 |
| B | ASP173 |
| B | ZN1454 |
| B | HOH2056 |
| F | G1 |
