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4ZCM

Crystal Structure of Escherichia coli GTPase BipA/TypA Complexed with ppGpp

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0000166molecular_functionnucleotide binding
A0003723molecular_functionRNA binding
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005975biological_processcarbohydrate metabolic process
A0016787molecular_functionhydrolase activity
A0019843molecular_functionrRNA binding
A0042254biological_processribosome biogenesis
A0043022molecular_functionribosome binding
A0097216molecular_functionguanosine tetraphosphate binding
A1990904cellular_componentribonucleoprotein complex
B0000049molecular_functiontRNA binding
B0000166molecular_functionnucleotide binding
B0003723molecular_functionRNA binding
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005975biological_processcarbohydrate metabolic process
B0016787molecular_functionhydrolase activity
B0019843molecular_functionrRNA binding
B0042254biological_processribosome biogenesis
B0043022molecular_functionribosome binding
B0097216molecular_functionguanosine tetraphosphate binding
B1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue NCO A 1001
ChainResidue
AGLN482
AARG483
AGLN484
AASN485
ASER530
AASP573

site_idAC2
Number of Residues1
Detailsbinding site for residue NCO A 1002
ChainResidue
AASP159

site_idAC3
Number of Residues16
Detailsbinding site for residue G4P A 1003
ChainResidue
AASP15
AHIS16
AGLY17
ALYS18
ATHR19
ATHR20
AASN128
ALYS129
AASP131
ASER166
AALA167
ALEU168
AGLN292
AASN293
AHIS13
AVAL14

site_idAC4
Number of Residues6
Detailsbinding site for residue NCO B 1001
ChainResidue
BGLN482
BARG483
BGLN484
BASN485
BSER530
BASP573

site_idAC5
Number of Residues1
Detailsbinding site for residue NCO B 1002
ChainResidue
BASP159

site_idAC6
Number of Residues12
Detailsbinding site for residue G4P B 1003
ChainResidue
BVAL14
BASP15
BHIS16
BGLY17
BLYS18
BTHR19
BTHR20
BLYS129
BASP131
BALA167
BLEU168
BGLY244

Functional Information from PROSITE/UniProt
site_idPS00301
Number of Residues16
DetailsG_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DSndlEKeRGITIlaK
ChainResidueDetails
AASP44-LYS59

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00849
ChainResidueDetails
AASP15
AASN128
BASP15
BASN128

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:26163516, ECO:0007744|PDB:4ZCL, ECO:0007744|PDB:4ZCM, ECO:0007744|PDB:5A9W
ChainResidueDetails
ASER166
BSER166

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PDB entries from 2024-04-24

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