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4Z9S

Non-covalent assembly of monoubiquitin that mimics K11 poly-ubiquitin

Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue MLA A 101
ChainResidue
APRO37
AASP39
AGLN40
AARG74
AHOH225
BPRO37
BASP39
BGLN40
BARG74

site_idAC2
Number of Residues6
Detailsbinding site for residue MLA A 102
ChainResidue
ALEU15
AGLU16
AASP32
ALYS33
BGLU24
BGLY53

site_idAC3
Number of Residues4
Detailsbinding site for residue SCN A 103
ChainResidue
AGLN49
AASP52
AHOH226
DLYS33

site_idAC4
Number of Residues4
Detailsbinding site for residue SCN A 104
ChainResidue
ALYS6
AGLU64
BPHE4
BTHR12

site_idAC5
Number of Residues2
Detailsbinding site for residue SCN A 105
ChainResidue
ATHR7
ATHR9

site_idAC6
Number of Residues4
Detailsbinding site for residue SCN A 106
ChainResidue
ALYS48
AASP58
ATYR59
DARG54

site_idAC7
Number of Residues7
Detailsbinding site for residue MLA B 101
ChainResidue
ALYS33
BARG42
BLEU50
BGLU51
BASP52
BARG72
BHOH221

site_idAC8
Number of Residues3
Detailsbinding site for residue SCN B 102
ChainResidue
BLEU71
DHOH206
DHOH217

site_idAC9
Number of Residues2
Detailsbinding site for residue SCN B 103
ChainResidue
BLYS33
CARG72

site_idAD1
Number of Residues7
Detailsbinding site for residue MLA C 101
ChainResidue
BTHR14
BLEU15
BGLU16
BLYS33
CGLU51
CGLY53
CARG54

site_idAD2
Number of Residues12
Detailsbinding site for residue MLA C 102
ChainResidue
BGLY35
CGLY35
CPRO37
CASP39
CGLN40
CARG74
CHOH201
CHOH217
DPRO37
DASP39
DGLN40
DARG74

site_idAD3
Number of Residues3
Detailsbinding site for residue SCN C 103
ChainResidue
CGLU16
CHOH229
DGLY53

site_idAD4
Number of Residues4
Detailsbinding site for residue SCN C 104
ChainResidue
ALYS48
AGLN49
AGLU51
CGLU16

site_idAD5
Number of Residues7
Detailsbinding site for residue MLA D 101
ChainResidue
CLYS33
DARG42
DLEU50
DGLU51
DASP52
DARG72
DHOH226

site_idAD6
Number of Residues3
Detailsbinding site for residue SCN D 102
ChainResidue
BGLY35
DPRO37
DGLN40

Functional Information from PROSITE/UniProt
site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
ALYS27-ASP52

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsSITE: Interacts with activating enzyme
ChainResidueDetails
AARG54
AARG72
BARG54
BARG72
CARG54
CARG72
DARG54
DARG72

site_idSWS_FT_FI2
Number of Residues4
DetailsSITE: Essential for function
ChainResidueDetails
AHIS68
BHIS68
CHIS68
DHIS68

site_idSWS_FT_FI3
Number of Residues4
DetailsMOD_RES: Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62979
ChainResidueDetails
ASER65
BSER65
CSER65
DSER65

site_idSWS_FT_FI4
Number of Residues4
DetailsMOD_RES: ADP-ribosylglycine => ECO:0000250|UniProtKB:P62979
ChainResidueDetails
AGLY76
BGLY76
CGLY76
DGLY76

site_idSWS_FT_FI5
Number of Residues28
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
ChainResidueDetails
ALYS6
BLYS27
BLYS29
BLYS33
BLYS48
BLYS63
CLYS6
CLYS11
CLYS27
CLYS29
CLYS33
ALYS11
CLYS48
CLYS63
DLYS6
DLYS11
DLYS27
DLYS29
DLYS33
DLYS48
DLYS63
ALYS27
ALYS29
ALYS33
ALYS48
ALYS63
BLYS6
BLYS11

site_idSWS_FT_FI6
Number of Residues8
DetailsCROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
ChainResidueDetails
AGLY76
BGLY76
CGLY76
DGLY76

218853

PDB entries from 2024-04-24

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