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4Z7Z

Structure of the enzyme-product complex resulting from TDG action on a GT mismatch in the presence of excess base

Functional Information from GO Data
ChainGOidnamespacecontents
A0000700molecular_functionmismatch base pair DNA N-glycosylase activity
A0006285biological_processbase-excision repair, AP site formation
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue EDO A 401
ChainResidue
AASN131
ALEU132
AGLN223
AARG225

site_idAC2
Number of Residues9
Detailsbinding site for residue ACY A 402
ChainResidue
AHOH503
AHOH504
AHOH547
DORP17
AGLY138
AILE139
AASN140
ATYR152
AASN191

site_idAC3
Number of Residues23
Detailsbinding site for Poly-Saccharide residues DA D 16 through DG D 18
ChainResidue
AASN140
AASN157
ASER200
ASER271
ASER273
AALA274
AARG275
ACYS276
AALA277
AGLN278
AACY402
AHOH533
AHOH572
CDA10
CDC11
CDG12
CDT13
CDG14
DDC15
DDT19
DHOH108
DHOH110
DHOH129

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS248

Catalytic Information from CSA
site_idMCSA1
Number of Residues2
DetailsM-CSA 834
ChainResidueDetails
AASN140electrostatic interaction
AHIS151proton acceptor, proton donor

219140

PDB entries from 2024-05-01

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