4Z7Z
Structure of the enzyme-product complex resulting from TDG action on a GT mismatch in the presence of excess base
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 90.729, 53.460, 82.033 |
Unit cell angles | 90.00, 95.54, 90.00 |
Refinement procedure
Resolution | 39.260 - 1.830 |
R-factor | 0.195 |
Rwork | 0.193 |
R-free | 0.23700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4fnc |
RMSD bond length | 0.010 |
RMSD bond angle | 0.990 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.4) |
Phasing software | PHASER |
Refinement software | BUSTER-TNT (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.260 | 1.870 |
High resolution limit [Å] | 1.830 | 1.830 |
Rmerge | 0.057 | |
Number of reflections | 34165 | |
<I/σ(I)> | 10.2 | 0.4 |
Completeness [%] | 98.5 | 91.5 |
Redundancy | 8.8 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG 4000, 0.2M ammonium acetate, 0.1M sodium acetate |