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4Z7B

Structure of the enzyme-product complex resulting from TDG action on a GfC mismatch

Functional Information from GO Data
ChainGOidnamespacecontents
A0000700molecular_functionmismatch base pair DNA N-glycosylase activity
A0006285biological_processbase-excision repair, AP site formation
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue EDO A 401
ChainResidue
ATHR190
AASN191
AMET192
AGLU194
AGLY211
AILE214
ALEU215
ALYS218
AHOH535

site_idAC2
Number of Residues8
Detailsbinding site for residue ACY A 402
ChainResidue
AILE139
AASN140
ATYR152
AASN191
AHOH501
AHOH505
AHOH531
DORP17

site_idAC3
Number of Residues3
Detailsbinding site for residue ACY A 403
ChainResidue
AGLN255
APRO256
ALYS258

site_idAC4
Number of Residues26
Detailsbinding site for Poly-Saccharide residues DA D 16 through DG D 18
ChainResidue
AILE139
AASN140
AASN157
AGLY199
ASER200
ALYS201
ASER271
ASER273
AALA274
AARG275
ACYS276
AALA277
AGLN278
AACY402
AHOH502
AHOH557
CDA10
CDC11
CDG12
CDT13
CDG14
DDC15
DDT19
DHOH104
DHOH122
DHOH124

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS248

Catalytic Information from CSA
site_idMCSA1
Number of Residues2
DetailsM-CSA 834
ChainResidueDetails
AASN140electrostatic interaction
AHIS151proton acceptor, proton donor

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PDB entries from 2025-06-18

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