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4YYU

Ficin C crystal form I

Functional Information from GO Data
ChainGOidnamespacecontents
A0004197molecular_functioncysteine-type endopeptidase activity
A0005615cellular_componentextracellular space
A0005764cellular_componentlysosome
A0006508biological_processproteolysis
A0008234molecular_functioncysteine-type peptidase activity
A0051603biological_processproteolysis involved in protein catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue SO4 A 301
ChainResidue
ALYS72
AGLU114
AHIS115
AHOH405
AHOH436
AHOH498
AHOH499
AHOH502
AHOH540

site_idAC2
Number of Residues6
Detailsbinding site for residue SO4 A 302
ChainResidue
AARG21
AALA93
ALYS94
AHOH440
AHOH479
AHOH611

site_idAC3
Number of Residues9
Detailsbinding site for residue SO4 A 303
ChainResidue
AGLN10
AASN119
APRO203
AHOH415
AHOH462
AHOH473
AHOH521
AHOH553
AHOH630

site_idAC4
Number of Residues8
Detailsbinding site for residue SO4 A 304
ChainResidue
ACYS98
ALYS100
AASN122
AMES307
AHOH407
AHOH443
AHOH491
AHOH643

site_idAC5
Number of Residues7
Detailsbinding site for residue SO4 A 305
ChainResidue
AASN62
AASN122
AMES307
AHOH404
AHOH409
AHOH566
AHOH582

site_idAC6
Number of Residues13
Detailsbinding site for residue MES A 306
ChainResidue
ALYS39
AASP43
AGLU44
ALEU45
APRO46
ASER47
ASER85
AVAL107
APRO203
AHOH463
AHOH536
AHOH576
AHOH593

site_idAC7
Number of Residues13
Detailsbinding site for residue MES A 307
ChainResidue
ALEU1
AASP55
ACYS56
AALA57
ATHR58
AASN62
ALYS95
AASN122
ALYS125
ASO4304
ASO4305
AHOH455
AHOH572

site_idAC8
Number of Residues16
Detailsbinding site for Ligand residues SCH A 25 through TRP A 26 bound to SER A 24
ChainResidue
AGLN19
AGLY23
ASER24
AALA27
APHE28
ASER29
AVAL30
ALEU53
AGLY64
AGLY67
AGLY68
AMET70
AHIS162
AALA163
ATHR220
AALA221

Functional Information from PROSITE/UniProt
site_idPS00139
Number of Residues12
DetailsTHIOL_PROTEASE_CYS Eukaryotic thiol (cysteine) proteases cysteine active site. QGrCGSCWAfSV
ChainResidueDetails
AGLN19-VAL30

site_idPS00639
Number of Residues11
DetailsTHIOL_PROTEASE_HIS Eukaryotic thiol (cysteine) proteases histidine active site. LDHAVVAIGYG
ChainResidueDetails
ALEU160-GLY170

site_idPS00640
Number of Residues20
DetailsTHIOL_PROTEASE_ASN Eukaryotic thiol (cysteine) proteases asparagine active site. YWLvRNSWgtnWGerGYIkL
ChainResidueDetails
ATYR177-LEU196

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PDB entries from 2024-07-10

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