4YWJ
Crystal structure of 4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) from Pseudomonas aeruginosa
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0008839 | molecular_function | 4-hydroxy-tetrahydrodipicolinate reductase |
A | 0009085 | biological_process | lysine biosynthetic process |
A | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016726 | molecular_function | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor |
A | 0019877 | biological_process | diaminopimelate biosynthetic process |
A | 0050661 | molecular_function | NADP binding |
A | 0051287 | molecular_function | NAD binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0008839 | molecular_function | 4-hydroxy-tetrahydrodipicolinate reductase |
B | 0009085 | biological_process | lysine biosynthetic process |
B | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016726 | molecular_function | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor |
B | 0019877 | biological_process | diaminopimelate biosynthetic process |
B | 0050661 | molecular_function | NADP binding |
B | 0051287 | molecular_function | NAD binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 26 |
Details | binding site for residue NAD A 300 |
Chain | Residue |
A | VAL7 |
A | VAL81 |
A | GLY99 |
A | THR101 |
A | ALA123 |
A | ALA124 |
A | ASN125 |
A | PHE126 |
A | ARG237 |
A | PHE240 |
A | PGE301 |
A | ALA10 |
A | HOH412 |
A | HOH423 |
A | HOH431 |
A | HOH452 |
A | HOH462 |
A | HOH478 |
A | HOH499 |
A | GLY11 |
A | ARG12 |
A | MET13 |
A | ASP35 |
A | ARG36 |
A | PHE76 |
A | THR77 |
site_id | AC2 |
Number of Residues | 7 |
Details | binding site for residue PGE A 301 |
Chain | Residue |
A | THR101 |
A | ALA124 |
A | ASN125 |
A | PHE240 |
A | NAD300 |
A | HOH430 |
A | HOH454 |
site_id | AC3 |
Number of Residues | 4 |
Details | binding site for residue BU1 A 302 |
Chain | Residue |
A | ILE153 |
A | THR218 |
A | HOH415 |
A | HOH500 |
site_id | AC4 |
Number of Residues | 2 |
Details | binding site for residue CL A 303 |
Chain | Residue |
A | THR139 |
B | THR139 |
site_id | AC5 |
Number of Residues | 23 |
Details | binding site for residue NAD B 300 |
Chain | Residue |
B | VAL7 |
B | GLY8 |
B | ALA10 |
B | GLY11 |
B | ARG12 |
B | MET13 |
B | ASP35 |
B | ARG36 |
B | PHE76 |
B | THR77 |
B | VAL81 |
B | GLY99 |
B | THR101 |
B | ALA123 |
B | ALA124 |
B | ASN125 |
B | PHE126 |
B | ARG237 |
B | PHE240 |
B | PGE301 |
B | HOH415 |
B | HOH467 |
B | HOH469 |
site_id | AC6 |
Number of Residues | 5 |
Details | binding site for residue PGE B 301 |
Chain | Residue |
B | ASN125 |
B | PHE240 |
B | NAD300 |
B | HOH413 |
B | HOH505 |
site_id | AC7 |
Number of Residues | 6 |
Details | binding site for residue BU1 B 302 |
Chain | Residue |
B | ILE153 |
B | ASP216 |
B | HIS217 |
B | THR218 |
B | HOH416 |
B | HOH417 |
Functional Information from PROSITE/UniProt
site_id | PS01298 |
Number of Residues | 18 |
Details | DAPB Dihydrodipicolinate reductase signature. EIiEaHhrhKvDapSGTA |
Chain | Residue | Details |
A | GLU151-ALA168 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00102 |
Chain | Residue | Details |
A | HIS156 | |
B | HIS156 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor => ECO:0000255|HAMAP-Rule:MF_00102 |
Chain | Residue | Details |
A | LYS160 | |
B | LYS160 |
site_id | SWS_FT_FI3 |
Number of Residues | 14 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00102 |
Chain | Residue | Details |
A | GLY8 | |
B | ARG36 | |
B | GLY99 | |
B | ALA123 | |
B | HIS157 | |
B | GLY166 | |
A | ASP35 | |
A | ARG36 | |
A | GLY99 | |
A | ALA123 | |
A | HIS157 | |
A | GLY166 | |
B | GLY8 | |
B | ASP35 |