4YWJ
Crystal structure of 4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) from Pseudomonas aeruginosa
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-25 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.978560 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 93.010, 101.500, 144.510 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.287 - 1.800 |
R-factor | 0.1694 |
Rwork | 0.168 |
R-free | 0.20060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1arz |
RMSD bond length | 0.007 |
RMSD bond angle | 0.991 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (dev_1980) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.850 |
High resolution limit [Å] | 1.800 | 8.050 | 1.800 |
Rmerge | 0.048 | 0.018 | 0.517 |
Rmeas | 0.053 | 0.020 | 0.578 |
Total number of observations | 316725 | ||
Number of reflections | 63326 | 745 | 4654 |
<I/σ(I)> | 18.11 | 46.34 | 2.9 |
Completeness [%] | 99.4 | 92.2 | 100 |
Redundancy | 5 | 5.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 290 | Morpheus D9: 20mM of each: 1,6-Hexanediol; 1-Butanol, 1,2-Propanediol (racemic); 2-Propanol; 1,4-Butanediol; 1,3-Propanediol; 100mM Tris Base / Bicine pH 8.5, 30% each PEG 550MME, PEG 20000; PsaeA.00820.a.B1.PW37541 at 22.65 mg/ml; cryo: direct; tray 259740d90, puck hxm4-4 |