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4YMA

Structure of the ligand-binding domain of GluA2 in complex with the antagonist CNG10109

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue SO4 B 301
ChainResidue
BLYS144
BARG148
BARG163
BHOH409
BHOH410
BHOH428

site_idAC2
Number of Residues7
Detailsbinding site for residue SO4 B 302
ChainResidue
BHOH767
BHOH770
BHOH774
BHOH775
BLYS60
BTYR61
B4E5304

site_idAC3
Number of Residues2
Detailsbinding site for residue GOL B 303
ChainResidue
BHIS46
BLYS240

site_idAC4
Number of Residues16
Detailsbinding site for residue 4E5 B 304
ChainResidue
BTYR61
BPRO89
BLEU90
BTHR91
BARG96
BLEU138
BSER142
BTHR143
BGLU193
BSO4302
BHOH522
BHOH532
BHOH571
BHOH735
BHOH763
BHOH774

site_idAC5
Number of Residues4
Detailsbinding site for residue EDO B 305
ChainResidue
ALEU26
BGLU30
BHOH433
BHOH526

site_idAC6
Number of Residues2
Detailsbinding site for residue EDO B 306
ChainResidue
BLYS116
BHOH588

site_idAC7
Number of Residues7
Detailsbinding site for residue ACT A 301
ChainResidue
APRO105
APHE106
AMET107
ASER108
AASN242
AHOH611
BSER217

site_idAC8
Number of Residues1
Detailsbinding site for residue SO4 A 302
ChainResidue
ALYS185

site_idAC9
Number of Residues4
Detailsbinding site for residue SO4 A 303
ChainResidue
ALYS144
AARG148
AHOH404
AHOH676

site_idAD1
Number of Residues4
Detailsbinding site for residue SO4 A 304
ChainResidue
ALYS82
ALYS185
AHOH428
AHOH432

site_idAD2
Number of Residues6
Detailsbinding site for residue SO4 A 305
ChainResidue
ALYS60
ATYR61
A4E5307
AHOH664
AHOH695
AHOH703

site_idAD3
Number of Residues6
Detailsbinding site for residue GOL A 306
ChainResidue
AHIS46
AALA233
ALEU236
AALA237
ALYS240
AHOH687

site_idAD4
Number of Residues14
Detailsbinding site for residue 4E5 A 307
ChainResidue
ATYR61
APRO89
ALEU90
ATHR91
AARG96
ALEU138
ASER142
ATHR143
AGLU193
ASO4305
AHOH504
AHOH527
AHOH571
AHOH691

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:11086992, ECO:0000269|PubMed:16483599, ECO:0007744|PDB:1FTJ, ECO:0007744|PDB:2CMO
ChainResidueDetails
BPRO89
ASER142
ATHR143
AGLU193
BTHR91
BARG96
BSER142
BTHR143
BGLU193
APRO89
ATHR91
AARG96

site_idSWS_FT_FI2
Number of Residues6
DetailsSITE: Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
ChainResidueDetails
BARG64
BARG148
BLYS240
AARG64
AARG148
ALYS240

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
ChainResidueDetails
BILE121
AILE121

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
ChainResidueDetails
BSER150
ASER150

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
ChainResidueDetails
BSER184
ASER184

site_idSWS_FT_FI6
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
BASN3
AASN3

223166

PDB entries from 2024-07-31

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