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4YAI

Crystal structure of LigL in complex with NADH and GGE from Sphingobium sp. strain SYK-6

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0005829cellular_componentcytosol
A0016491molecular_functionoxidoreductase activity
B0000166molecular_functionnucleotide binding
B0005829cellular_componentcytosol
B0016491molecular_functionoxidoreductase activity
Functional Information from PDB Data
site_idAC1
Number of Residues34
Detailsbinding site for residue NAD A 500
ChainResidue
AGLY12
AASP64
AVAL65
AASN91
AALA92
AGLY93
AILE114
ATHR142
AALA143
ASER144
ATYR158
ASER15
ALYS162
APRO188
AGLY189
APRO190
AILE191
ASER193
AARG194
AILE195
AASN201
AHOH694
AGLY16
AHOH695
AHOH699
AHOH701
AHOH863
AHOH874
AILE17
AASP36
AILE37
AARG38
AHIS41
ALEU63

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 501
ChainResidue
AHOH603
AHOH620
AHOH626
AHOH669
AHOH674
AHOH777

site_idAC3
Number of Residues32
Detailsbinding site for residue NAD B 500
ChainResidue
BGLY12
BSER15
BGLY16
BILE17
BASP36
BILE37
BARG38
BHIS41
BLEU63
BASP64
BVAL65
BASN91
BALA92
BGLY93
BILE114
BTHR142
BALA143
BSER144
BTYR158
BLYS162
BPRO188
BGLY189
BPRO190
BILE191
BSER193
BARG194
BILE195
BGGE501
BHOH685
BHOH695
BHOH713
BHOH811

site_idAC4
Number of Residues9
Detailsbinding site for residue GGE B 501
ChainResidue
BASP95
BSER144
BMET155
BTYR158
BPRO188
BGLY189
BILE195
BARG222
BTRP255

Functional Information from PROSITE/UniProt
site_idPS00061
Number of Residues29
DetailsADH_SHORT Short-chain dehydrogenases/reductases family signature. LagltpmpsfMaiYATAKAAViTLTeTIR
ChainResidueDetails
ALEU145-ARG173

222415

PDB entries from 2024-07-10

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