4XXV
Crystal structure of 3-isopropylmalate dehydrogenase from Burkholderia thailandensis in complex with NAD
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0003862 | molecular_function | 3-isopropylmalate dehydrogenase activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0008652 | biological_process | amino acid biosynthetic process |
| A | 0009082 | biological_process | branched-chain amino acid biosynthetic process |
| A | 0009098 | biological_process | L-leucine biosynthetic process |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051287 | molecular_function | NAD binding |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0003862 | molecular_function | 3-isopropylmalate dehydrogenase activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0008652 | biological_process | amino acid biosynthetic process |
| B | 0009082 | biological_process | branched-chain amino acid biosynthetic process |
| B | 0009098 | biological_process | L-leucine biosynthetic process |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0051287 | molecular_function | NAD binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 29 |
| Details | binding site for residue NAD B 400 |
| Chain | Residue |
| A | ASN192 |
| B | GLU83 |
| B | ILE259 |
| B | GLU276 |
| B | HIS279 |
| B | GLY280 |
| B | SER281 |
| B | ALA282 |
| B | PRO283 |
| B | ASP284 |
| B | ILE285 |
| A | TYR220 |
| B | ALA291 |
| B | ASN292 |
| B | GOL401 |
| B | HOH587 |
| B | HOH612 |
| B | HOH623 |
| B | HOH640 |
| B | HOH679 |
| B | HOH723 |
| B | HOH949 |
| A | ASN223 |
| A | HOH546 |
| A | HOH556 |
| B | ILE11 |
| B | ALA67 |
| B | VAL68 |
| B | GLY69 |
| site_id | AC2 |
| Number of Residues | 10 |
| Details | binding site for residue GOL B 401 |
| Chain | Residue |
| A | LYS190 |
| B | ARG90 |
| B | ARG100 |
| B | ARG128 |
| B | TYR135 |
| B | ASP246 |
| B | SER278 |
| B | NAD400 |
| B | HOH654 |
| B | HOH957 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue GOL B 402 |
| Chain | Residue |
| B | PHE99 |
| B | TYR306 |
| B | HOH631 |
| B | HOH890 |
Functional Information from PROSITE/UniProt
| site_id | PS00470 |
| Number of Residues | 20 |
| Details | IDH_IMDH Isocitrate and isopropylmalate dehydrogenases signature. NMFGDIlSDeaSmlt.GSIGM |
| Chain | Residue | Details |
| A | ASN242-MET261 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 36 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01033","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | Site: {"description":"Important for catalysis","evidences":[{"source":"HAMAP-Rule","id":"MF_01033","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
