4XWW
Crystal structure of RNase J complexed with RNA
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003723 | molecular_function | RNA binding |
A | 0004519 | molecular_function | endonuclease activity |
A | 0004521 | molecular_function | RNA endonuclease activity |
A | 0004527 | molecular_function | exonuclease activity |
A | 0004534 | molecular_function | 5'-3' RNA exonuclease activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0006364 | biological_process | rRNA processing |
A | 0006396 | biological_process | RNA processing |
A | 0008270 | molecular_function | zinc ion binding |
A | 0046872 | molecular_function | metal ion binding |
B | 0003723 | molecular_function | RNA binding |
B | 0004519 | molecular_function | endonuclease activity |
B | 0004521 | molecular_function | RNA endonuclease activity |
B | 0004527 | molecular_function | exonuclease activity |
B | 0004534 | molecular_function | 5'-3' RNA exonuclease activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0006364 | biological_process | rRNA processing |
B | 0006396 | biological_process | RNA processing |
B | 0008270 | molecular_function | zinc ion binding |
B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue ZN A 601 |
Chain | Residue |
A | HIS84 |
A | HIS86 |
A | HIS153 |
A | ASP175 |
A | ZN602 |
D | HOH107 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue ZN A 602 |
Chain | Residue |
A | ZN601 |
D | U2 |
D | HOH107 |
A | ASP88 |
A | HIS89 |
A | HIS403 |
site_id | AC3 |
Number of Residues | 2 |
Details | binding site for residue MN A 603 |
Chain | Residue |
A | GLY59 |
A | ASP456 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue GOL A 604 |
Chain | Residue |
A | ARG407 |
A | HOH788 |
A | HOH938 |
A | HOH1063 |
B | VAL354 |
B | TYR370 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue GOL A 605 |
Chain | Residue |
A | VAL354 |
A | VAL358 |
A | HOH777 |
A | HOH816 |
A | HOH885 |
B | ARG407 |
site_id | AC6 |
Number of Residues | 5 |
Details | binding site for residue ZN B 601 |
Chain | Residue |
B | ASP88 |
B | HIS89 |
B | HIS403 |
B | ZN602 |
E | U2 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue ZN B 602 |
Chain | Residue |
B | HIS84 |
B | HIS86 |
B | HIS153 |
B | ASP175 |
B | ZN601 |
site_id | AC8 |
Number of Residues | 2 |
Details | binding site for residue MN B 603 |
Chain | Residue |
B | GLY59 |
B | ASP456 |