4XWW
Crystal structure of RNase J complexed with RNA
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003723 | molecular_function | RNA binding |
| A | 0004518 | molecular_function | nuclease activity |
| A | 0004519 | molecular_function | endonuclease activity |
| A | 0004521 | molecular_function | RNA endonuclease activity |
| A | 0004527 | molecular_function | exonuclease activity |
| A | 0004534 | molecular_function | 5'-3' RNA exonuclease activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006364 | biological_process | rRNA processing |
| A | 0006396 | biological_process | RNA processing |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0003723 | molecular_function | RNA binding |
| B | 0004518 | molecular_function | nuclease activity |
| B | 0004519 | molecular_function | endonuclease activity |
| B | 0004521 | molecular_function | RNA endonuclease activity |
| B | 0004527 | molecular_function | exonuclease activity |
| B | 0004534 | molecular_function | 5'-3' RNA exonuclease activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006364 | biological_process | rRNA processing |
| B | 0006396 | biological_process | RNA processing |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue ZN A 601 |
| Chain | Residue |
| A | HIS84 |
| A | HIS86 |
| A | HIS153 |
| A | ASP175 |
| A | ZN602 |
| D | HOH107 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue ZN A 602 |
| Chain | Residue |
| A | ZN601 |
| D | U2 |
| D | HOH107 |
| A | ASP88 |
| A | HIS89 |
| A | HIS403 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | binding site for residue MN A 603 |
| Chain | Residue |
| A | GLY59 |
| A | ASP456 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue GOL A 604 |
| Chain | Residue |
| A | ARG407 |
| A | HOH788 |
| A | HOH938 |
| A | HOH1063 |
| B | VAL354 |
| B | TYR370 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue GOL A 605 |
| Chain | Residue |
| A | VAL354 |
| A | VAL358 |
| A | HOH777 |
| A | HOH816 |
| A | HOH885 |
| B | ARG407 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue ZN B 601 |
| Chain | Residue |
| B | ASP88 |
| B | HIS89 |
| B | HIS403 |
| B | ZN602 |
| E | U2 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | binding site for residue ZN B 602 |
| Chain | Residue |
| B | HIS84 |
| B | HIS86 |
| B | HIS153 |
| B | ASP175 |
| B | ZN601 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | binding site for residue MN B 603 |
| Chain | Residue |
| B | GLY59 |
| B | ASP456 |
