4XJN

Structure of the parainfluenza virus 5 nucleocapsid-RNA complex: an insight into paramyxovirus polymerase activity

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003723	molecular_function	RNA binding
A	0005198	molecular_function	structural molecule activity
A	0019013	cellular_component	viral nucleocapsid
A	0019028	cellular_component	viral capsid
A	0019029	cellular_component	helical viral capsid
A	0030430	cellular_component	host cell cytoplasm
A	0044423	cellular_component	virion component
A	1990904	cellular_component	ribonucleoprotein complex
B	0003723	molecular_function	RNA binding
B	0005198	molecular_function	structural molecule activity
B	0019013	cellular_component	viral nucleocapsid
B	0019028	cellular_component	viral capsid
B	0019029	cellular_component	helical viral capsid
B	0030430	cellular_component	host cell cytoplasm
B	0044423	cellular_component	virion component
B	1990904	cellular_component	ribonucleoprotein complex
C	0003723	molecular_function	RNA binding
C	0005198	molecular_function	structural molecule activity
C	0019013	cellular_component	viral nucleocapsid
C	0019028	cellular_component	viral capsid
C	0019029	cellular_component	helical viral capsid
C	0030430	cellular_component	host cell cytoplasm
C	0044423	cellular_component	virion component
C	1990904	cellular_component	ribonucleoprotein complex
D	0003723	molecular_function	RNA binding
D	0005198	molecular_function	structural molecule activity
D	0019013	cellular_component	viral nucleocapsid
D	0019028	cellular_component	viral capsid
D	0019029	cellular_component	helical viral capsid
D	0030430	cellular_component	host cell cytoplasm
D	0044423	cellular_component	virion component
D	1990904	cellular_component	ribonucleoprotein complex
E	0003723	molecular_function	RNA binding
E	0005198	molecular_function	structural molecule activity
E	0019013	cellular_component	viral nucleocapsid
E	0019028	cellular_component	viral capsid
E	0019029	cellular_component	helical viral capsid
E	0030430	cellular_component	host cell cytoplasm
E	0044423	cellular_component	virion component
E	1990904	cellular_component	ribonucleoprotein complex
F	0003723	molecular_function	RNA binding
F	0005198	molecular_function	structural molecule activity
F	0019013	cellular_component	viral nucleocapsid
F	0019028	cellular_component	viral capsid
F	0019029	cellular_component	helical viral capsid
F	0030430	cellular_component	host cell cytoplasm
F	0044423	cellular_component	virion component
F	1990904	cellular_component	ribonucleoprotein complex
G	0003723	molecular_function	RNA binding
G	0005198	molecular_function	structural molecule activity
G	0019013	cellular_component	viral nucleocapsid
G	0019028	cellular_component	viral capsid
G	0019029	cellular_component	helical viral capsid
G	0030430	cellular_component	host cell cytoplasm
G	0044423	cellular_component	virion component
G	1990904	cellular_component	ribonucleoprotein complex
H	0003723	molecular_function	RNA binding
H	0005198	molecular_function	structural molecule activity
H	0019013	cellular_component	viral nucleocapsid
H	0019028	cellular_component	viral capsid
H	0019029	cellular_component	helical viral capsid
H	0030430	cellular_component	host cell cytoplasm
H	0044423	cellular_component	virion component
H	1990904	cellular_component	ribonucleoprotein complex
I	0003723	molecular_function	RNA binding
I	0005198	molecular_function	structural molecule activity
I	0019013	cellular_component	viral nucleocapsid
I	0019028	cellular_component	viral capsid
I	0019029	cellular_component	helical viral capsid
I	0030430	cellular_component	host cell cytoplasm
I	0044423	cellular_component	virion component
I	1990904	cellular_component	ribonucleoprotein complex
J	0003723	molecular_function	RNA binding
J	0005198	molecular_function	structural molecule activity
J	0019013	cellular_component	viral nucleocapsid
J	0019028	cellular_component	viral capsid
J	0019029	cellular_component	helical viral capsid
J	0030430	cellular_component	host cell cytoplasm
J	0044423	cellular_component	virion component
J	1990904	cellular_component	ribonucleoprotein complex
K	0003723	molecular_function	RNA binding
K	0005198	molecular_function	structural molecule activity
K	0019013	cellular_component	viral nucleocapsid
K	0019028	cellular_component	viral capsid
K	0019029	cellular_component	helical viral capsid
K	0030430	cellular_component	host cell cytoplasm
K	0044423	cellular_component	virion component
K	1990904	cellular_component	ribonucleoprotein complex
L	0003723	molecular_function	RNA binding
L	0005198	molecular_function	structural molecule activity
L	0019013	cellular_component	viral nucleocapsid
L	0019028	cellular_component	viral capsid
L	0019029	cellular_component	helical viral capsid
L	0030430	cellular_component	host cell cytoplasm
L	0044423	cellular_component	virion component
L	1990904	cellular_component	ribonucleoprotein complex
M	0003723	molecular_function	RNA binding
M	0005198	molecular_function	structural molecule activity
M	0019013	cellular_component	viral nucleocapsid
M	0019028	cellular_component	viral capsid
M	0019029	cellular_component	helical viral capsid
M	0030430	cellular_component	host cell cytoplasm
M	0044423	cellular_component	virion component
M	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	1
Details	binding site for residue PB A 601

Chain	Residue
N	U11

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site_id	AC2
Number of Residues	3
Details	binding site for residue PB D 601

Chain	Residue
D	GLY385
D	GLU390
I	ARG391

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site_id	AC3
Number of Residues	2
Details	binding site for residue PB M 603

Chain	Residue
M	ARG224
N	U5

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site_id	AC4
Number of Residues	2
Details	binding site for residue PB M 604

Chain	Residue
M	CYS181
N	U5

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site_id	AC5
Number of Residues	3
Details	binding site for residue PB N 101

Chain	Residue
N	U53
N	U54
G	CYS181

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	65
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"O57286","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

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