Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

4XJN

Structure of the parainfluenza virus 5 nucleocapsid-RNA complex: an insight into paramyxovirus polymerase activity

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003723	molecular_function	RNA binding
A	0005198	molecular_function	structural molecule activity
A	0019013	cellular_component	viral nucleocapsid
A	0019029	cellular_component	helical viral capsid
A	0030430	cellular_component	host cell cytoplasm
A	1990904	cellular_component	ribonucleoprotein complex
B	0003723	molecular_function	RNA binding
B	0005198	molecular_function	structural molecule activity
B	0019013	cellular_component	viral nucleocapsid
B	0019029	cellular_component	helical viral capsid
B	0030430	cellular_component	host cell cytoplasm
B	1990904	cellular_component	ribonucleoprotein complex
C	0003723	molecular_function	RNA binding
C	0005198	molecular_function	structural molecule activity
C	0019013	cellular_component	viral nucleocapsid
C	0019029	cellular_component	helical viral capsid
C	0030430	cellular_component	host cell cytoplasm
C	1990904	cellular_component	ribonucleoprotein complex
D	0003723	molecular_function	RNA binding
D	0005198	molecular_function	structural molecule activity
D	0019013	cellular_component	viral nucleocapsid
D	0019029	cellular_component	helical viral capsid
D	0030430	cellular_component	host cell cytoplasm
D	1990904	cellular_component	ribonucleoprotein complex
E	0003723	molecular_function	RNA binding
E	0005198	molecular_function	structural molecule activity
E	0019013	cellular_component	viral nucleocapsid
E	0019029	cellular_component	helical viral capsid
E	0030430	cellular_component	host cell cytoplasm
E	1990904	cellular_component	ribonucleoprotein complex
F	0003723	molecular_function	RNA binding
F	0005198	molecular_function	structural molecule activity
F	0019013	cellular_component	viral nucleocapsid
F	0019029	cellular_component	helical viral capsid
F	0030430	cellular_component	host cell cytoplasm
F	1990904	cellular_component	ribonucleoprotein complex
G	0003723	molecular_function	RNA binding
G	0005198	molecular_function	structural molecule activity
G	0019013	cellular_component	viral nucleocapsid
G	0019029	cellular_component	helical viral capsid
G	0030430	cellular_component	host cell cytoplasm
G	1990904	cellular_component	ribonucleoprotein complex
H	0003723	molecular_function	RNA binding
H	0005198	molecular_function	structural molecule activity
H	0019013	cellular_component	viral nucleocapsid
H	0019029	cellular_component	helical viral capsid
H	0030430	cellular_component	host cell cytoplasm
H	1990904	cellular_component	ribonucleoprotein complex
I	0003723	molecular_function	RNA binding
I	0005198	molecular_function	structural molecule activity
I	0019013	cellular_component	viral nucleocapsid
I	0019029	cellular_component	helical viral capsid
I	0030430	cellular_component	host cell cytoplasm
I	1990904	cellular_component	ribonucleoprotein complex
J	0003723	molecular_function	RNA binding
J	0005198	molecular_function	structural molecule activity
J	0019013	cellular_component	viral nucleocapsid
J	0019029	cellular_component	helical viral capsid
J	0030430	cellular_component	host cell cytoplasm
J	1990904	cellular_component	ribonucleoprotein complex
K	0003723	molecular_function	RNA binding
K	0005198	molecular_function	structural molecule activity
K	0019013	cellular_component	viral nucleocapsid
K	0019029	cellular_component	helical viral capsid
K	0030430	cellular_component	host cell cytoplasm
K	1990904	cellular_component	ribonucleoprotein complex
L	0003723	molecular_function	RNA binding
L	0005198	molecular_function	structural molecule activity
L	0019013	cellular_component	viral nucleocapsid
L	0019029	cellular_component	helical viral capsid
L	0030430	cellular_component	host cell cytoplasm
L	1990904	cellular_component	ribonucleoprotein complex
M	0003723	molecular_function	RNA binding
M	0005198	molecular_function	structural molecule activity
M	0019013	cellular_component	viral nucleocapsid
M	0019029	cellular_component	helical viral capsid
M	0030430	cellular_component	host cell cytoplasm
M	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	1
Details	binding site for residue PB A 601

Chain	Residue
N	U11

site_id	AC2
Number of Residues	3
Details	binding site for residue PB D 601

Chain	Residue
D	GLY385
D	GLU390
I	ARG391

site_id	AC3
Number of Residues	2
Details	binding site for residue PB M 603

Chain	Residue
M	ARG224
N	U5

site_id	AC4
Number of Residues	2
Details	binding site for residue PB M 604

Chain	Residue
M	CYS181
N	U5

site_id	AC5
Number of Residues	3
Details	binding site for residue PB N 101

Chain	Residue
N	U53
N	U54
G	CYS181

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	65
Details	BINDING: BINDING => ECO:0000250\|UniProtKB:O57286

Chain	Residue	Details
A	LYS180
B	ARG354
C	LYS180
C	ARG195
C	TYR260
C	TYR350
C	ARG354
D	LYS180
D	ARG195
D	TYR260
D	TYR350
A	ARG195
D	ARG354
E	LYS180
E	ARG195
E	TYR260
E	TYR350
E	ARG354
F	LYS180
F	ARG195
F	TYR260
F	TYR350
A	TYR260
F	ARG354
G	LYS180
G	ARG195
G	TYR260
G	TYR350
G	ARG354
H	LYS180
H	ARG195
H	TYR260
H	TYR350
A	TYR350
H	ARG354
I	LYS180
I	ARG195
I	TYR260
I	TYR350
I	ARG354
J	LYS180
J	ARG195
J	TYR260
J	TYR350
A	ARG354
J	ARG354
K	LYS180
K	ARG195
K	TYR260
K	TYR350
K	ARG354
L	LYS180
L	ARG195
L	TYR260
L	TYR350
B	LYS180
L	ARG354
M	LYS180
M	ARG195
M	TYR260
M	TYR350
M	ARG354
B	ARG195
B	TYR260
B	TYR350

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)