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4XJ5

Crystal structure of Vibrio cholerae DncV 3'-deoxy GTP bound form

Functional Information from GO Data
ChainGOidnamespacecontents
A0140701molecular_function3',3'-cyclic GMP-AMP synthase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue MG A 1001
ChainResidue
AASP131
AASP133
AGH31014
AHOH1282

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 1002
ChainResidue
AHOH1303
AASP131
AASP133
AASP193
AGH31013
AGH31014

site_idAC3
Number of Residues5
Detailsbinding site for residue EDO A 1003
ChainResidue
AALA292
AASN394
AMET395
AGLY398
AHOH1221

site_idAC4
Number of Residues6
Detailsbinding site for residue EDO A 1004
ChainResidue
AGLY297
AGLY298
ASER300
AHOH1127
AHOH1188
AHOH1253

site_idAC5
Number of Residues3
Detailsbinding site for residue EDO A 1005
ChainResidue
ALYS277
AALA316
AGLU324

site_idAC6
Number of Residues5
Detailsbinding site for residue EDO A 1006
ChainResidue
AMET3
ATRP5
AGLU381
ASER382
AALA383

site_idAC7
Number of Residues8
Detailsbinding site for residue EDO A 1007
ChainResidue
APHE64
ATRP294
AASP295
AVAL296
AHOH1116
AHOH1120
AHOH1141
AHOH1197

site_idAC8
Number of Residues8
Detailsbinding site for residue EDO A 1008
ChainResidue
ALYS29
ASER114
APHE115
AASP118
ATHR119
ALEU120
AARG284
AHOH1183

site_idAC9
Number of Residues1
Detailsbinding site for residue EDO A 1009
ChainResidue
AARG108

site_idAD1
Number of Residues4
Detailsbinding site for residue EDO A 1010
ChainResidue
ASER314
AHIS332
AGLU336
AHOH1340

site_idAD2
Number of Residues6
Detailsbinding site for residue EDO A 1011
ChainResidue
APHE7
ATYR11
AGLY323
ALEU377
AGLU381
AILE393

site_idAD3
Number of Residues9
Detailsbinding site for residue EDO A 1012
ChainResidue
ALYS277
AHIS317
AASP318
AALA319
AHOH1106
AHOH1106
AHOH1132
AHOH1137
AHOH1256

site_idAD4
Number of Residues10
Detailsbinding site for residue GH3 A 1013
ChainResidue
AGLN112
AASP133
ALYS177
ATHR179
ACYS180
AASP193
ATYR197
ASER259
AMG1002
AGH31014

site_idAD5
Number of Residues24
Detailsbinding site for residue GH3 A 1014
ChainResidue
AGLN112
AGLY113
ASER114
ATYR117
AASP131
AASP133
ALYS287
ASER301
AASP348
ALEU352
AMG1001
AMG1002
AGH31013
AHOH1184
AHOH1199
AHOH1207
AHOH1250
AHOH1272
AHOH1279
AHOH1282
AHOH1283
AHOH1284
AHOH1286
AHOH1303

site_idAD6
Number of Residues5
Detailsbinding site for residue NA A 1015
ChainResidue
ATRP289
ALYS369
ALEU373
AILE376
AHOH1181

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:25131990, ECO:0000269|PubMed:25201413, ECO:0000269|PubMed:25865248, ECO:0007744|PDB:4U03, ECO:0007744|PDB:4U0M, ECO:0007744|PDB:4XJ3, ECO:0007744|PDB:4XJ4, ECO:0007744|PDB:4XJ5
ChainResidueDetails
AGLN112
ALYS287
ASER301

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:25131990, ECO:0000269|PubMed:25201413, ECO:0000269|PubMed:25865248, ECO:0007744|PDB:4TXY, ECO:0007744|PDB:4TXZ, ECO:0007744|PDB:4TY0, ECO:0007744|PDB:4U03, ECO:0007744|PDB:4U0N, ECO:0007744|PDB:4XJ5
ChainResidueDetails
AASP131
AASP133
AASP193

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:25131990, ECO:0000269|PubMed:25201413, ECO:0007744|PDB:4U0M
ChainResidueDetails
AARG182

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:25131990, ECO:0000269|PubMed:25201413, ECO:0007744|PDB:4U03, ECO:0007744|PDB:4XJ3, ECO:0007744|PDB:4XJ4, ECO:0007744|PDB:4XJ5
ChainResidueDetails
ASER259

site_idSWS_FT_FI5
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:25131990, ECO:0000269|PubMed:25201413, ECO:0000269|PubMed:25865248, ECO:0007744|PDB:4U03, ECO:0007744|PDB:4U0M, ECO:0007744|PDB:4XJ3, ECO:0007744|PDB:4XJ5
ChainResidueDetails
AASP348

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PDB entries from 2024-10-30

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