Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4XIK

Crystal structure of NanB sialidase from streptococcus pneumoniae in complex with DMSO

Functional Information from GO Data
ChainGOidnamespacecontents
A0004308molecular_functionexo-alpha-sialidase activity
A0005737cellular_componentcytoplasm
A0005975biological_processcarbohydrate metabolic process
A0006689biological_processganglioside catabolic process
A0009313biological_processoligosaccharide catabolic process
A0016020cellular_componentmembrane
A0016787molecular_functionhydrolase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue DMS A 701
ChainResidue
AARG245
AILE246
AARG264
AASP270
AILE326
AASP327
ATYR653

site_idAC2
Number of Residues4
Detailsbinding site for residue DMS A 702
ChainResidue
AGLN494
ATHR657
ATYR250
ATHR251

site_idAC3
Number of Residues5
Detailsbinding site for residue DMS A 703
ChainResidue
AGLY163
AASP217
AVAL220
AHOH1243
AHOH1250

site_idAC4
Number of Residues5
Detailsbinding site for residue DMS A 704
ChainResidue
AGLU194
AASP448
ALEU450
AHOH851
AHOH990

site_idAC5
Number of Residues4
Detailsbinding site for residue DMS A 705
ChainResidue
ASER530
AALA531
ASER532
AHOH980

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000250
ChainResidueDetails
AASP270

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: ACT_SITE => ECO:0000255
ChainResidueDetails
AGLU541

site_idSWS_FT_FI3
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000250
ChainResidueDetails
ATYR653

site_idSWS_FT_FI4
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AARG245
AARG557
AARG619

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon