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4XDP

Crystal structure of human KDM4C catalytic domain bound to tris

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
ACYS236
AHIS242
ACYS308
ACYS310

site_idAC2
Number of Residues4
Detailsbinding site for residue FE A 402
ChainResidue
AHIS190
AGLU192
AHIS278
ATRS403

site_idAC3
Number of Residues7
Detailsbinding site for residue TRS A 403
ChainResidue
AGLU192
ASER198
AASN200
AHIS278
ASER290
AFE402
AHIS190

site_idAC4
Number of Residues3
Detailsbinding site for residue PGE A 404
ChainResidue
ALEU67
AASN139
AILE142

site_idAC5
Number of Residues1
Detailsbinding site for residue EDO A 405
ChainResidue
AHOH501

site_idAC6
Number of Residues1
Detailsbinding site for residue PGE A 406
ChainResidue
AGLN90

site_idAC7
Number of Residues5
Detailsbinding site for residue CL A 407
ChainResidue
AARG324
ALYS325
AHOH583
BARG112
BTYR113

site_idAC8
Number of Residues3
Detailsbinding site for residue CL A 408
ChainResidue
AARG112
BPRO111
BARG112

site_idAC9
Number of Residues2
Detailsbinding site for residue CL A 409
ChainResidue
ATRP183
BARG112

site_idAD1
Number of Residues3
Detailsbinding site for residue CL A 410
ChainResidue
AVAL296
AHOH551
AHOH555

site_idAD2
Number of Residues4
Detailsbinding site for residue ZN B 401
ChainResidue
BCYS236
BHIS242
BCYS308
BCYS310

site_idAD3
Number of Residues4
Detailsbinding site for residue FE B 402
ChainResidue
BHIS190
BGLU192
BHIS278
BTRS403

site_idAD4
Number of Residues6
Detailsbinding site for residue TRS B 403
ChainResidue
BHIS190
BGLU192
BSER198
BASN200
BHIS278
BFE402

site_idAD5
Number of Residues4
Detailsbinding site for residue PG4 B 404
ChainResidue
BLEU67
BHOH508
BHOH508
BHOH611

site_idAD6
Number of Residues4
Detailsbinding site for residue CL B 405
ChainResidue
AARG112
ATYR113
BARG324
BLYS325

site_idAD7
Number of Residues4
Detailsbinding site for residue CL B 406
ChainResidue
AARG112
BASN126
BTRP183
BHOH523

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues84
DetailsDomain: {"description":"JmjN","evidences":[{"source":"PROSITE-ProRule","id":"PRU00537","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues332
DetailsDomain: {"description":"JmjC","evidences":[{"source":"PROSITE-ProRule","id":"PRU00538","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"B2RXH2","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21914792","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

249697

PDB entries from 2026-02-25

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