4X57
Structure of an Arabidopsis E2 / Membrane-anchored Ubiquitin-fold Protein Complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0000209 | biological_process | protein polyubiquitination |
| A | 0004842 | molecular_function | ubiquitin-protein transferase activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006511 | biological_process | ubiquitin-dependent protein catabolic process |
| A | 0009960 | biological_process | endosperm development |
| A | 0016567 | biological_process | protein ubiquitination |
| A | 0016740 | molecular_function | transferase activity |
| A | 0061631 | molecular_function | ubiquitin conjugating enzyme activity |
| B | 0003674 | molecular_function | molecular_function |
| B | 0005886 | cellular_component | plasma membrane |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0000209 | biological_process | protein polyubiquitination |
| C | 0004842 | molecular_function | ubiquitin-protein transferase activity |
| C | 0005515 | molecular_function | protein binding |
| C | 0005524 | molecular_function | ATP binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006511 | biological_process | ubiquitin-dependent protein catabolic process |
| C | 0009960 | biological_process | endosperm development |
| C | 0016567 | biological_process | protein ubiquitination |
| C | 0016740 | molecular_function | transferase activity |
| C | 0061631 | molecular_function | ubiquitin conjugating enzyme activity |
| D | 0003674 | molecular_function | molecular_function |
| D | 0005886 | cellular_component | plasma membrane |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | binding site for residue SO4 A 201 |
| Chain | Residue |
| A | LEU13 |
| A | PRO17 |
| A | SER22 |
| A | ALA23 |
| B | SER60 |
| B | VAL86 |
| B | HIS88 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 C 201 |
| Chain | Residue |
| C | SER22 |
| C | ALA23 |
| D | SER60 |
| C | LEU13 |
| C | PRO17 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 C 202 |
| Chain | Residue |
| C | HIS32 |
| C | THR53 |
| C | HIS55 |
| C | ARG70 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 C 203 |
| Chain | Residue |
| C | VAL49 |
| C | LEU51 |
| C | THR71 |
| C | TYR145 |
| C | ALA146 |
| D | ILE63 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 C 204 |
| Chain | Residue |
| C | VAL26 |
| C | ALA27 |
| C | HIS32 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 D 201 |
| Chain | Residue |
| C | ARG131 |
| C | ALA132 |
| D | LYS10 |
| D | ASP18 |
Functional Information from PROSITE/UniProt
| site_id | PS00183 |
| Number of Residues | 16 |
| Details | UBC_1 Ubiquitin-conjugating (UBC) active site signature. FHPNInsn.GsICLdiL |
| Chain | Residue | Details |
| A | PHE74-LEU89 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 292 |
| Details | Domain: {"description":"UBC core","evidences":[{"source":"PROSITE-ProRule","id":"PRU00388","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Glycyl thioester intermediate","evidences":[{"source":"PROSITE-ProRule","id":"PRU00388","evidenceCode":"ECO:0000255"},{"source":"PROSITE-ProRule","id":"PRU10133","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 132 |
| Details | Domain: {"description":"Ubiquitin-like","evidences":[{"source":"PROSITE-ProRule","id":"PRU00214","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
