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4WWC

Crystal structure of full length YvoA in complex with palindromic operator DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003700molecular_functionDNA-binding transcription factor activity
A0006355biological_processregulation of DNA-templated transcription
A0045892biological_processnegative regulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0003700molecular_functionDNA-binding transcription factor activity
B0006355biological_processregulation of DNA-templated transcription
B0045892biological_processnegative regulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue EDO A 301
ChainResidue
AMET49
BMET49

site_idAC2
Number of Residues7
Detailsbinding site for residue EDO B 301
ChainResidue
BTHR87
BSER88
BASP92
BGLN183
BARG211
BTYR228
BTYR233

site_idAC3
Number of Residues5
Detailsbinding site for residue EDO B 302
ChainResidue
AGLN53
BMET49
BARG52
EDT7
EDC8

site_idAC4
Number of Residues1
Detailsbinding site for residue EDO B 303
ChainResidue
BTHR132

site_idAC5
Number of Residues4
Detailsbinding site for residue EDO B 304
ChainResidue
BTYR167
BTHR213
BPHE221
BGLU222

site_idAC6
Number of Residues2
Detailsbinding site for residue EDO E 101
ChainResidue
EDC13
FDT7

site_idAC7
Number of Residues4
Detailsbinding site for residue EDO E 102
ChainResidue
EDG5
EDG6
FDC14
FDA15

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues38
DetailsDNA_BIND: H-T-H motif => ECO:0000255|PROSITE-ProRule:PRU00307
ChainResidueDetails
AGLU37-SER56
BGLU37-SER56

site_idSWS_FT_FI2
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:25564531, ECO:0007744|PDB:4U0W
ChainResidueDetails
APHE89
BSER165
BGLU222
BTYR228
AARG133
AGLU145
ASER165
AGLU222
ATYR228
BPHE89
BARG133
BGLU145

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PDB entries from 2024-10-09

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