4WWC

Crystal structure of full length YvoA in complex with palindromic operator DNA

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003677	molecular_function	DNA binding
A	0003700	molecular_function	DNA-binding transcription factor activity
A	0006355	biological_process	regulation of DNA-templated transcription
A	0045892	biological_process	negative regulation of DNA-templated transcription
B	0003677	molecular_function	DNA binding
B	0003700	molecular_function	DNA-binding transcription factor activity
B	0006355	biological_process	regulation of DNA-templated transcription
B	0045892	biological_process	negative regulation of DNA-templated transcription

Functional Information from PDB Data

site_id	AC1
Number of Residues	2
Details	binding site for residue EDO A 301

Chain	Residue
A	MET49
B	MET49

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site_id	AC2
Number of Residues	7
Details	binding site for residue EDO B 301

Chain	Residue
B	THR87
B	SER88
B	ASP92
B	GLN183
B	ARG211
B	TYR228
B	TYR233

---

site_id	AC3
Number of Residues	5
Details	binding site for residue EDO B 302

Chain	Residue
A	GLN53
B	MET49
B	ARG52
E	DT7
E	DC8

---

site_id	AC4
Number of Residues	1
Details	binding site for residue EDO B 303

Chain	Residue
B	THR132

---

site_id	AC5
Number of Residues	4
Details	binding site for residue EDO B 304

Chain	Residue
B	TYR167
B	THR213
B	PHE221
B	GLU222

---

site_id	AC6
Number of Residues	2
Details	binding site for residue EDO E 101

Chain	Residue
E	DC13
F	DT7

---

site_id	AC7
Number of Residues	4
Details	binding site for residue EDO E 102

Chain	Residue
E	DG5
E	DG6
F	DC14
F	DA15

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	136
Details	Domain: {"description":"HTH gntR-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00307","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	38
Details	DNA binding: {"description":"H-T-H motif","evidences":[{"source":"PROSITE-ProRule","id":"PRU00307","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	12
Details	Binding site: {"evidences":[{"source":"PubMed","id":"25564531","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4U0W","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

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