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4WVD

Identification of a novel FXR ligand that regulates metabolism

Replaces:  4II6
Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0006355biological_processregulation of DNA-templated transcription
A0032052molecular_functionbile acid binding
A0038183biological_processbile acid signaling pathway
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0006355biological_processregulation of DNA-templated transcription
B0032052molecular_functionbile acid binding
B0038183biological_processbile acid signaling pathway
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue FMT A 501
ChainResidue
AFMT502
AFMT504

site_idAC2
Number of Residues2
Detailsbinding site for residue FMT A 502
ChainResidue
AFMT501
AFMT503

site_idAC3
Number of Residues2
Detailsbinding site for residue FMT A 503
ChainResidue
AASP394
AFMT502

site_idAC4
Number of Residues4
Detailsbinding site for residue FMT A 504
ChainResidue
AHOH601
ALEU434
AFMT501
AHOH601

site_idAC5
Number of Residues13
Detailsbinding site for residue IVM A 505
ChainResidue
AARG264
ALYS272
AGLU276
AASN283
ALEU287
AMET290
AALA291
AASN293
AHIS294
AARG331
AILE335
ALEU348
AMET365

site_idAC6
Number of Residues3
Detailsbinding site for residue FMT B 501
ChainResidue
BLEU434
BFMT502
BFMT504

site_idAC7
Number of Residues2
Detailsbinding site for residue FMT B 502
ChainResidue
BFMT501
BFMT504

site_idAC8
Number of Residues1
Detailsbinding site for residue FMT B 503
ChainResidue
BASP394

site_idAC9
Number of Residues2
Detailsbinding site for residue FMT B 504
ChainResidue
BFMT501
BFMT502

site_idAD1
Number of Residues13
Detailsbinding site for residue IVM B 505
ChainResidue
BARG264
BLYS272
BGLU276
BASN283
BLEU287
BMET290
BASN293
BSER332
BPHE336
BLEU347
BLEU348
BTYR361
BMET365

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsMotif: {"description":"CORNR box 3"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PDB","id":"6HL1","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine; by PKC/PRKCZ","evidences":[{"source":"PubMed","id":"18668687","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1)","evidences":[{"source":"PubMed","id":"23546875","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

239149

PDB entries from 2025-07-23

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