Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

4V4P

Crystal structure of 70S ribosome with thrS operator and tRNAs.

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
A0	0003735	molecular_function	structural constituent of ribosome
A0	0005840	cellular_component	ribosome
A0	0006412	biological_process	translation
A0	0022625	cellular_component	cytosolic large ribosomal subunit
A0	1990904	cellular_component	ribonucleoprotein complex
A1	0003735	molecular_function	structural constituent of ribosome
A1	0005840	cellular_component	ribosome
A1	0006412	biological_process	translation
A1	0019843	molecular_function	rRNA binding
A2	0003723	molecular_function	RNA binding
A2	0003735	molecular_function	structural constituent of ribosome
A2	0005840	cellular_component	ribosome
A2	0006412	biological_process	translation
A3	0003735	molecular_function	structural constituent of ribosome
A3	0005840	cellular_component	ribosome
A3	0006412	biological_process	translation
A4	0003735	molecular_function	structural constituent of ribosome
A4	0005840	cellular_component	ribosome
A4	0006412	biological_process	translation
A5	0003735	molecular_function	structural constituent of ribosome
A5	0006412	biological_process	translation
A5	0015934	cellular_component	large ribosomal subunit
A6	0003735	molecular_function	structural constituent of ribosome
A6	0005840	cellular_component	ribosome
A6	0006412	biological_process	translation
A7	0003735	molecular_function	structural constituent of ribosome
A7	0005840	cellular_component	ribosome
A7	0006412	biological_process	translation
A8	0003735	molecular_function	structural constituent of ribosome
A8	0005840	cellular_component	ribosome
A8	0006412	biological_process	translation
A9	0003735	molecular_function	structural constituent of ribosome
A9	0005840	cellular_component	ribosome
A9	0006412	biological_process	translation
AC	0000049	molecular_function	tRNA binding
AC	0003723	molecular_function	RNA binding
AC	0003735	molecular_function	structural constituent of ribosome
AC	0005840	cellular_component	ribosome
AC	0006412	biological_process	translation
AC	0006417	biological_process	regulation of translation
AC	0015934	cellular_component	large ribosomal subunit
AC	0019843	molecular_function	rRNA binding
AC	0022625	cellular_component	cytosolic large ribosomal subunit
AC	1990904	cellular_component	ribonucleoprotein complex
AD	0003723	molecular_function	RNA binding
AD	0003735	molecular_function	structural constituent of ribosome
AD	0005840	cellular_component	ribosome
AD	0006412	biological_process	translation
AD	0015934	cellular_component	large ribosomal subunit
AD	0016740	molecular_function	transferase activity
AE	0003735	molecular_function	structural constituent of ribosome
AE	0005840	cellular_component	ribosome
AE	0006412	biological_process	translation
AF	0003735	molecular_function	structural constituent of ribosome
AF	0005840	cellular_component	ribosome
AF	0006412	biological_process	translation
AF	0019843	molecular_function	rRNA binding
AG	0003735	molecular_function	structural constituent of ribosome
AG	0005840	cellular_component	ribosome
AG	0006412	biological_process	translation
AH	0003735	molecular_function	structural constituent of ribosome
AH	0005840	cellular_component	ribosome
AH	0006412	biological_process	translation
AH	0019843	molecular_function	rRNA binding
AI	0003735	molecular_function	structural constituent of ribosome
AI	0005840	cellular_component	ribosome
AI	0006412	biological_process	translation
AJ	0003735	molecular_function	structural constituent of ribosome
AJ	0005840	cellular_component	ribosome
AJ	0006412	biological_process	translation
AK	0003735	molecular_function	structural constituent of ribosome
AK	0005840	cellular_component	ribosome
AK	0006412	biological_process	translation
AL	0003735	molecular_function	structural constituent of ribosome
AL	0005840	cellular_component	ribosome
AL	0006412	biological_process	translation
AM	0003735	molecular_function	structural constituent of ribosome
AM	0005840	cellular_component	ribosome
AM	0006412	biological_process	translation
AM	0015934	cellular_component	large ribosomal subunit
AN	0003735	molecular_function	structural constituent of ribosome
AN	0005840	cellular_component	ribosome
AN	0006412	biological_process	translation
AN	0015934	cellular_component	large ribosomal subunit
AO	0003735	molecular_function	structural constituent of ribosome
AO	0005840	cellular_component	ribosome
AO	0006412	biological_process	translation
AO	0015934	cellular_component	large ribosomal subunit
AP	0003735	molecular_function	structural constituent of ribosome
AP	0005840	cellular_component	ribosome
AP	0006412	biological_process	translation
AQ	0003735	molecular_function	structural constituent of ribosome
AQ	0005840	cellular_component	ribosome
AQ	0006412	biological_process	translation
AQ	0008097	molecular_function	5S rRNA binding
AR	0003735	molecular_function	structural constituent of ribosome
AR	0005840	cellular_component	ribosome
AR	0006412	biological_process	translation
AS	0003723	molecular_function	RNA binding
AS	0003735	molecular_function	structural constituent of ribosome
AS	0005840	cellular_component	ribosome
AS	0006412	biological_process	translation
AS	0015934	cellular_component	large ribosomal subunit
AS	0019843	molecular_function	rRNA binding
AS	0022625	cellular_component	cytosolic large ribosomal subunit
AS	1990904	cellular_component	ribonucleoprotein complex
AT	0003735	molecular_function	structural constituent of ribosome
AT	0005840	cellular_component	ribosome
AT	0006412	biological_process	translation
AT	0019843	molecular_function	rRNA binding
AU	0003723	molecular_function	RNA binding
AU	0003735	molecular_function	structural constituent of ribosome
AU	0005840	cellular_component	ribosome
AU	0006412	biological_process	translation
AU	0015934	cellular_component	large ribosomal subunit
AV	0003735	molecular_function	structural constituent of ribosome
AV	0005840	cellular_component	ribosome
AV	0006412	biological_process	translation
AV	0008097	molecular_function	5S rRNA binding
AW	0003735	molecular_function	structural constituent of ribosome
AW	0005840	cellular_component	ribosome
AW	0006412	biological_process	translation
AX	0003735	molecular_function	structural constituent of ribosome
AX	0005840	cellular_component	ribosome
AX	0006412	biological_process	translation
AX	0015934	cellular_component	large ribosomal subunit
AX	0022625	cellular_component	cytosolic large ribosomal subunit
AX	1990904	cellular_component	ribonucleoprotein complex
BE	0003723	molecular_function	RNA binding
BE	0003735	molecular_function	structural constituent of ribosome
BE	0005840	cellular_component	ribosome
BE	0006412	biological_process	translation
BE	0015935	cellular_component	small ribosomal subunit
BE	0019843	molecular_function	rRNA binding
BE	0022627	cellular_component	cytosolic small ribosomal subunit
BE	1990904	cellular_component	ribonucleoprotein complex
BF	0003676	molecular_function	nucleic acid binding
BF	0003723	molecular_function	RNA binding
BF	0003729	molecular_function	mRNA binding
BF	0003735	molecular_function	structural constituent of ribosome
BF	0005840	cellular_component	ribosome
BF	0006412	biological_process	translation
BF	0019843	molecular_function	rRNA binding
BF	0022627	cellular_component	cytosolic small ribosomal subunit
BF	1990904	cellular_component	ribonucleoprotein complex
BG	0003723	molecular_function	RNA binding
BG	0003735	molecular_function	structural constituent of ribosome
BG	0005840	cellular_component	ribosome
BG	0006412	biological_process	translation
BG	0015935	cellular_component	small ribosomal subunit
BG	0019843	molecular_function	rRNA binding
BG	0042274	biological_process	ribosomal small subunit biogenesis
BG	0046872	molecular_function	metal ion binding
BG	1990904	cellular_component	ribonucleoprotein complex
BH	0003723	molecular_function	RNA binding
BH	0003735	molecular_function	structural constituent of ribosome
BH	0005737	cellular_component	cytoplasm
BH	0005840	cellular_component	ribosome
BH	0006412	biological_process	translation
BH	0015935	cellular_component	small ribosomal subunit
BH	0019843	molecular_function	rRNA binding
BH	0043229	cellular_component	intracellular organelle
BH	1990904	cellular_component	ribonucleoprotein complex
BI	0003723	molecular_function	RNA binding
BI	0003735	molecular_function	structural constituent of ribosome
BI	0005737	cellular_component	cytoplasm
BI	0005840	cellular_component	ribosome
BI	0006412	biological_process	translation
BI	0019843	molecular_function	rRNA binding
BI	0022627	cellular_component	cytosolic small ribosomal subunit
BI	0043229	cellular_component	intracellular organelle
BI	0070181	molecular_function	small ribosomal subunit rRNA binding
BI	1990904	cellular_component	ribonucleoprotein complex
BJ	0000028	biological_process	ribosomal small subunit assembly
BJ	0000049	molecular_function	tRNA binding
BJ	0003723	molecular_function	RNA binding
BJ	0003729	molecular_function	mRNA binding
BJ	0003735	molecular_function	structural constituent of ribosome
BJ	0005840	cellular_component	ribosome
BJ	0006412	biological_process	translation
BJ	0015935	cellular_component	small ribosomal subunit
BJ	0019843	molecular_function	rRNA binding
BJ	0022627	cellular_component	cytosolic small ribosomal subunit
BJ	1990904	cellular_component	ribonucleoprotein complex
BK	0003735	molecular_function	structural constituent of ribosome
BK	0005840	cellular_component	ribosome
BK	0006412	biological_process	translation
BL	0000049	molecular_function	tRNA binding
BL	0003723	molecular_function	RNA binding
BL	0003735	molecular_function	structural constituent of ribosome
BL	0005737	cellular_component	cytoplasm
BL	0005840	cellular_component	ribosome
BL	0006412	biological_process	translation
BL	0019843	molecular_function	rRNA binding
BL	0043229	cellular_component	intracellular organelle
BL	1990904	cellular_component	ribonucleoprotein complex
BM	0000049	molecular_function	tRNA binding
BM	0003723	molecular_function	RNA binding
BM	0003735	molecular_function	structural constituent of ribosome
BM	0005840	cellular_component	ribosome
BM	0006412	biological_process	translation
BM	0015935	cellular_component	small ribosomal subunit
BM	0019843	molecular_function	rRNA binding
BM	1990904	cellular_component	ribonucleoprotein complex
BN	0003723	molecular_function	RNA binding
BN	0003735	molecular_function	structural constituent of ribosome
BN	0005840	cellular_component	ribosome
BN	0006412	biological_process	translation
BN	0019843	molecular_function	rRNA binding
BN	0022627	cellular_component	cytosolic small ribosomal subunit
BN	1990904	cellular_component	ribonucleoprotein complex
BO	0000049	molecular_function	tRNA binding
BO	0003723	molecular_function	RNA binding
BO	0003735	molecular_function	structural constituent of ribosome
BO	0005840	cellular_component	ribosome
BO	0006412	biological_process	translation
BO	0015935	cellular_component	small ribosomal subunit
BO	0019843	molecular_function	rRNA binding
BO	1990904	cellular_component	ribonucleoprotein complex
BP	0000049	molecular_function	tRNA binding
BP	0003676	molecular_function	nucleic acid binding
BP	0003723	molecular_function	RNA binding
BP	0003735	molecular_function	structural constituent of ribosome
BP	0005829	cellular_component	cytosol
BP	0005840	cellular_component	ribosome
BP	0006412	biological_process	translation
BP	0015935	cellular_component	small ribosomal subunit
BP	0019843	molecular_function	rRNA binding
BP	1990904	cellular_component	ribonucleoprotein complex
BQ	0003735	molecular_function	structural constituent of ribosome
BQ	0005840	cellular_component	ribosome
BQ	0006412	biological_process	translation
BR	0003723	molecular_function	RNA binding
BR	0003735	molecular_function	structural constituent of ribosome
BR	0005737	cellular_component	cytoplasm
BR	0005840	cellular_component	ribosome
BR	0006412	biological_process	translation
BR	0019843	molecular_function	rRNA binding
BR	0022627	cellular_component	cytosolic small ribosomal subunit
BR	0043229	cellular_component	intracellular organelle
BR	1990904	cellular_component	ribonucleoprotein complex
BS	0003735	molecular_function	structural constituent of ribosome
BS	0005737	cellular_component	cytoplasm
BS	0005840	cellular_component	ribosome
BS	0006412	biological_process	translation
BS	0015935	cellular_component	small ribosomal subunit
BS	0043229	cellular_component	intracellular organelle
BS	1990904	cellular_component	ribonucleoprotein complex
BT	0003735	molecular_function	structural constituent of ribosome
BT	0005840	cellular_component	ribosome
BT	0006412	biological_process	translation
BU	0003723	molecular_function	RNA binding
BU	0003735	molecular_function	structural constituent of ribosome
BU	0005840	cellular_component	ribosome
BU	0006412	biological_process	translation
BU	0019843	molecular_function	rRNA binding
BU	0070181	molecular_function	small ribosomal subunit rRNA binding
BU	1990904	cellular_component	ribonucleoprotein complex
BV	0000028	biological_process	ribosomal small subunit assembly
BV	0003723	molecular_function	RNA binding
BV	0003735	molecular_function	structural constituent of ribosome
BV	0005737	cellular_component	cytoplasm
BV	0005840	cellular_component	ribosome
BV	0006412	biological_process	translation
BV	0015935	cellular_component	small ribosomal subunit
BV	0019843	molecular_function	rRNA binding
BV	0022627	cellular_component	cytosolic small ribosomal subunit
BV	0043229	cellular_component	intracellular organelle
BV	1990904	cellular_component	ribonucleoprotein complex
BW	0003723	molecular_function	RNA binding
BW	0003735	molecular_function	structural constituent of ribosome
BW	0005829	cellular_component	cytosol
BW	0005840	cellular_component	ribosome
BW	0006412	biological_process	translation
BW	0015935	cellular_component	small ribosomal subunit
BW	0019843	molecular_function	rRNA binding
BW	0070181	molecular_function	small ribosomal subunit rRNA binding
BW	1990904	cellular_component	ribonucleoprotein complex
BX	0003723	molecular_function	RNA binding
BX	0005840	cellular_component	ribosome
BX	0019843	molecular_function	rRNA binding
BX	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00430
Number of Residues	28
Details	TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. srvgkkpieipagvtvtvng...............................................................................................NTVTVKGP

Chain	Residue	Details
AH	SER1-PRO28
AC	PRO1-LYS46

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. ALkaLgLrRlqQeRvledtpairgNVekVahLV

Chain	Residue	Details
AX	ALA22-VAL54

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FrageyaDvaGvTkGKGtqGpvkR

Chain	Residue	Details
AE	PHE193-ARG216

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. GDtVeVLrGdfAGee.GeV

Chain	Residue	Details
AU	GLY45-VAL62

site_id	PS00527
Number of Residues	23
Details	RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CvrcgrarsvyrfFGLCRiCLR

Chain	Residue	Details
BQ	ARG23-ARG45

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIiEsRPIS

Chain	Residue	Details
BT	GLY54-SER66

site_id	PS00475
Number of Residues	31
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGaGqVrhe..LtLiaddFSegArekVegaG

Chain	Residue	Details
AO	LYS107-GLY137

site_id	PS00962
Number of Residues	12
Details	RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VkELLEAGVHFG

Chain	Residue	Details
BE	VAL7-GLY18

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. IrALqaS.GLqVksivDdTPvPHN

Chain	Residue	Details
BN	ILE95-ASN117

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfrFgAlvVVGDrq.GrVGlGfgkap.EVpl.AV

Chain	Residue	Details
BH	GLY23-VAL55

site_id	PS00828
Number of Residues	26
Details	RIBOSOMAL_L36 Ribosomal protein L36 signature. CdnCkvVrRhgrVlViCsnv.KHkQrQ

Chain	Residue	Details
A9	CYS11-GLN36

site_id	PS00784
Number of Residues	20
Details	RIBOSOMAL_L34 Ribosomal protein L34 signature. KRTYQpnnrkRakth.GFraR

Chain	Residue	Details
A7	LYS2-ARG21

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. KrvLpRArGRadiikkrtSHITViL

Chain	Residue	Details
AS	LYS83-LEU107

site_id	PS00582
Number of Residues	20
Details	RIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNrrntQakLElkKYD

Chain	Residue	Details
A6	TYR22-ASP41

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRlgfAvSrrqARqLV

Chain	Residue	Details
BG	LEU97-VAL121

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKqhvpvyItenmVGhkLGEFapT

Chain	Residue	Details
BV	ASN53-THR77

site_id	PS00057
Number of Residues	24
Details	RIBOSOMAL_S18 Ribosomal protein S18 signature. RDYrn.VevLkrFLSEt.GKIlprRR

Chain	Residue	Details
BU	ARG32-ARG55

site_id	PS00063
Number of Residues	16
Details	ALDOKETO_REDUCTASE_3 Aldo/keto reductase family putative active site signature. LAKTIKraRIlGLlPF

Chain	Residue	Details
BU	LEU66-PHE81

site_id	PS00651
Number of Residues	28
Details	RIBOSOMAL_L9 Ribosomal protein L9 signature. GkkGeiknVadGYanNFLfkqglAieaT

Chain	Residue	Details
AK	GLY13-THR40

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkrgvrrp.DGsyirFdeNacVI

Chain	Residue	Details
AN	ALA60-ILE86

site_id	PS01143
Number of Residues	22
Details	RIBOSOMAL_L31 Ribosomal protein L31 signature. DVwsgvHPFWTgeerfldte....GR

Chain	Residue	Details
A4	ASP34-ARG55

site_id	PS01199
Number of Residues	20
Details	RIBOSOMAL_L1 Ribosomal protein L1 signature. MgaVgskLGriLGPRGlLPN

Chain	Residue	Details
AC	MET120-ASN139

site_id	PS00359
Number of Residues	16
Details	RIBOSOMAL_L11 Ribosomal protein L11 signature. KiIeGTakSMGiEVvD

Chain	Residue	Details
AL	LYS126-ASP141

site_id	PS00548
Number of Residues	35
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewaaqGrVplHt..LranIDygfalarTtyGvlG

Chain	Residue	Details
BF	ALA163-GLY197

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAVVRLSedddaqeV

Chain	Residue	Details
AT	LYS62-VAL77

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. LseHLkvhKkDhhShrgLlmMvgqrrrLlrY

Chain	Residue	Details
BR	LEU39-TYR69

site_id	PS01073
Number of Residues	18
Details	RIBOSOMAL_L24E Ribosomal protein L24e signature. YcGtdIePGtGtmFvHkD

Chain	Residue	Details
AR	TYR8-ASP25

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGksGQidAiklGiARAL

Chain	Residue	Details
BL	GLY67-LEU85

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. DvLvtaFInkimrdGKKnlaarIFydA

Chain	Residue	Details
BJ	ASP20-ALA46

site_id	PS00579
Number of Residues	15
Details	RIBOSOMAL_L29 Ribosomal protein L29 signature. NPGRIKeLRKAIARI

Chain	Residue	Details
AW	ASN42-ILE56

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaILSTSkGVLtdreAR

Chain	Residue	Details
BK	GLY108-ARG125

site_id	PS00018
Number of Residues	13
Details	EF_HAND_1 EF-hand calcium-binding domain. DGNTDGEVDlpDV

Chain	Residue	Details
AF	ASP9-VAL21

site_id	PS00939
Number of Residues	27
Details	RIBOSOMAL_L1E Ribosomal protein L1e signature. NdkeRqlAVrSALaATAdadlvadRGH

Chain	Residue	Details
AF	ASN103-HIS129

site_id	PS01048
Number of Residues	10
Details	RIBOSOMAL_S6 Ribosomal protein S6 signature. GlRRLAYpIA

Chain	Residue	Details
BI	GLY44-ALA53

site_id	PS00525
Number of Residues	9
Details	RIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGI

Chain	Residue	Details
AH	PRO153-ILE161

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR

Chain	Residue	Details
BO	LYS46-ARG53

site_id	PS00361
Number of Residues	16
Details	RIBOSOMAL_S10 Ribosomal protein S10 signature. ArrsGAqvsGPIpLPT

Chain	Residue	Details
BM	ALA27-THR42

site_id	PS00783
Number of Residues	24
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. IRGMLPhkkqrGReafesVrVYlG

Chain	Residue	Details
AM	ILE83-GLY106

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ

Chain	Residue	Details
BP	ARG88-GLN101

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PnvRGVAmNAvD

Chain	Residue	Details
AD	PRO222-ASP233

site_id	PS00358
Number of Residues	17
Details	RIBOSOMAL_L5 Ribosomal protein L5 signature. LgeITGQmpVrTkAKrT

Chain	Residue	Details
AG	LEU41-THR57

site_id	PS00936
Number of Residues	27
Details	RIBOSOMAL_L35 Ribosomal protein L35 signature. KTHkMAkRRIkitgtgkvmafksgk.RH

Chain	Residue	Details
A8	LYS5-HIS31

site_id	PS00831
Number of Residues	15
Details	RIBOSOMAL_L27 Ribosomal protein L27 signature. GnILvRQRGtkfkaG

Chain	Residue	Details
A3	GLY34-GLY48

site_id	PS00937
Number of Residues	17
Details	RIBOSOMAL_L20 Ribosomal protein L20 signature. KrdfRrLWIQRINagaR

Chain	Residue	Details
A1	LYS54-ARG70

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	BINDING: BINDING => ECO:0000269\|PubMed:11866529

Chain	Residue	Details
BQ	VAL25
BQ	GLY28
BQ	ARG41
BQ	LEU44

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)