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4UXX

Structure of delta4-DgkA with AMPPCP in 9.9 MAG

GO(遺伝子オントロジー)由来の情報
鎖名GO(遺伝子オントロジー)id名前空間内容
A0004143molecular_functionATP-dependent diacylglycerol kinase activity
A0005524molecular_functionATP binding
A0005886cellular_componentplasma membrane
A0006654biological_processphosphatidic acid biosynthetic process
A0008610biological_processlipid biosynthetic process
A0008654biological_processphospholipid biosynthetic process
A0009411biological_processresponse to UV
A0016020cellular_componentmembrane
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
B0004143molecular_functionATP-dependent diacylglycerol kinase activity
B0005524molecular_functionATP binding
B0005886cellular_componentplasma membrane
B0006654biological_processphosphatidic acid biosynthetic process
B0008610biological_processlipid biosynthetic process
B0008654biological_processphospholipid biosynthetic process
B0009411biological_processresponse to UV
B0016020cellular_componentmembrane
B0016301molecular_functionkinase activity
B0016310biological_processphosphorylation
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
C0004143molecular_functionATP-dependent diacylglycerol kinase activity
C0005524molecular_functionATP binding
C0005886cellular_componentplasma membrane
C0006654biological_processphosphatidic acid biosynthetic process
C0008610biological_processlipid biosynthetic process
C0008654biological_processphospholipid biosynthetic process
C0009411biological_processresponse to UV
C0016020cellular_componentmembrane
C0016301molecular_functionkinase activity
C0016310biological_processphosphorylation
C0042802molecular_functionidentical protein binding
C0046872molecular_functionmetal ion binding
PDBデータベースに由来する情報
site_idAC1
残基数3
詳細BINDING SITE FOR RESIDUE ZN C 1121
鎖名残基
CGLU28
CGLU76
CACP1123

site_idAC2
残基数2
詳細BINDING SITE FOR RESIDUE ZN C 1122
鎖名残基
CGLU76
CACP1123

site_idAC3
残基数3
詳細BINDING SITE FOR RESIDUE CL A 1121
鎖名残基
AASN27
AALA29
AARG32

site_idAC4
残基数17
詳細BINDING SITE FOR RESIDUE ACP C 1123
鎖名残基
BTYR16
BHOH2001
CGLU28
CASN72
CGLU76
CGLU85
CTYR86
CHIS87
CSER90
CGLY91
CLYS94
CASP95
CZN1121
CZN1122
COLC1125
CHOH2004
BARG9

site_idAC5
残基数5
詳細BINDING SITE FOR RESIDUE MPD B 1122
鎖名残基
AARG81
BGLU88
BLEU89
BSER90
BARG92

site_idAC6
残基数3
詳細BINDING SITE FOR RESIDUE NA A 1122
鎖名残基
AGLU28
AGLU76
AACT1123

site_idAC7
残基数3
詳細BINDING SITE FOR RESIDUE ACT A 1123
鎖名残基
AGLU28
AGLU76
ANA1122

site_idAC8
残基数7
詳細BINDING SITE FOR RESIDUE OLC C 1124
鎖名残基
BARG9
BILE10
CALA30
CGLN33
CGLU34
CCYS113
COLC1125

site_idAC9
残基数10
詳細BINDING SITE FOR RESIDUE OLC B 1123
鎖名残基
ASER17
ACYS113
ATRP117
BGLU34
BALA37
BILE44
BGLU69
BASN72
BLEU102
BOLC1124

site_idBC1
残基数7
詳細BINDING SITE FOR RESIDUE OLC B 1124
鎖名残基
AILE10
ATRP117
BGLN33
BGLU34
BTRP112
BTRP117
BOLC1123

site_idBC2
残基数3
詳細BINDING SITE FOR RESIDUE OLC A 1124
鎖名残基
ATRP18
ATRP25
AILE26

site_idBC3
残基数12
詳細BINDING SITE FOR RESIDUE OLC A 1125
鎖名残基
AGLN33
AGLU34
AALA37
AILE44
AVAL62
AALA108
AVAL109
ATRP112
ALEU116
BLEU39
BLEU40
BTRP47

site_idBC4
残基数10
詳細BINDING SITE FOR RESIDUE OLC C 1125
鎖名残基
BALA13
BSER17
CGLU69
CASN72
CSER98
CLEU102
CILE106
CVAL109
CACP1123
COLC1124

site_idBC5
残基数8
詳細BINDING SITE FOR RESIDUE ACT B 1125
鎖名残基
BGLU76
BGLY83
BSER84
BGLU85
BTYR86
BHIS87
BLYS94
BNA1126

site_idBC6
残基数3
詳細BINDING SITE FOR RESIDUE NA B 1126
鎖名残基
BGLU28
BGLU76
BACT1125

site_idBC7
残基数2
詳細BINDING SITE FOR RESIDUE NA C 1126
鎖名残基
CGLU88
CGLU88

site_idBC8
残基数1
詳細BINDING SITE FOR RESIDUE ACT A 1126
鎖名残基
AHIS119

UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_idPS01069
残基数12
詳細DAGK_PROKAR Prokaryotic diacylglycerol kinase signature. ElLNSAIEavVD
鎖名残基詳細
AGLU69-ASP80

SwissProt/UniProtに記載されている蛋白質分子機能情報
site_idSWS_FT_FI1
残基数87
詳細TOPO_DOM: Cytoplasmic => ECO:0000269|PubMed:8071224
鎖名残基詳細
AALA1-ALA30
BALA1-ALA30
CALA1-ALA30

site_idSWS_FT_FI2
残基数99
詳細TRANSMEM: Helical => ECO:0000305|PubMed:12379131, ECO:0000305|PubMed:8071224
鎖名残基詳細
APHE31-TRP47
AASP51-VAL68
BPHE31-TRP47
BASP51-VAL68
CPHE31-TRP47
CASP51-VAL68

site_idSWS_FT_FI3
残基数6
詳細TOPO_DOM: Periplasmic => ECO:0000305|PubMed:12379131, ECO:0000305|PubMed:8071224
鎖名残基詳細
ALEU48-VAL50
BLEU48-VAL50
CLEU48-VAL50

site_idSWS_FT_FI4
残基数75
詳細TOPO_DOM: Cytoplasmic => ECO:0000305|PubMed:8071224
鎖名残基詳細
AGLU69-LYS94
BGLU69-LYS94
CGLU69-LYS94

site_idSWS_FT_FI5
残基数69
詳細TRANSMEM: Helical => ECO:0000305|PubMed:8071224
鎖名残基詳細
AASP95-SER118
BASP95-SER118
CASP95-SER118

site_idSWS_FT_FI6
残基数6
詳細TOPO_DOM: Periplasmic => ECO:0000269|PubMed:15919996, ECO:0000269|PubMed:8071224
鎖名残基詳細
AHIS119-GLY121
BHIS119-GLY121
CHIS119-GLY121

site_idSWS_FT_FI7
残基数3
詳細ACT_SITE: Proton acceptor => ECO:0000305|PubMed:26673816
鎖名残基詳細
AGLU69
BGLU69
CGLU69

site_idSWS_FT_FI8
残基数3
詳細BINDING: BINDING => ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538
鎖名残基詳細
AARG9
BARG9
CARG9

site_idSWS_FT_FI9
残基数3
詳細BINDING: BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129
鎖名残基詳細
AALA13
BALA13
CALA13

site_idSWS_FT_FI10
残基数15
詳細BINDING: BINDING => ECO:0000305|PubMed:26673816, ECO:0000305|Ref.26
鎖名残基詳細
ATYR16
BLYS94
CTYR16
CGLU28
CGLU76
CGLU85
CLYS94
AGLU28
AGLU76
AGLU85
ALYS94
BTYR16
BGLU28
BGLU76
BGLU85

site_idSWS_FT_FI11
残基数3
詳細BINDING: BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26960129
鎖名残基詳細
AARG22
BARG22
CARG22

site_idSWS_FT_FI12
残基数3
詳細BINDING: BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129
鎖名残基詳細
AALA30
BALA30
CALA30

site_idSWS_FT_FI13
残基数3
詳細BINDING: BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.25
鎖名残基詳細
ATRP47
BTRP47
CTRP47

site_idSWS_FT_FI14
残基数3
詳細BINDING: BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.25
鎖名残基詳細
AARG55
BARG55
CARG55

site_idSWS_FT_FI15
残基数3
詳細BINDING: BINDING => ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.26
鎖名残基詳細
AGLU69
BGLU69
CGLU69

site_idSWS_FT_FI16
残基数3
詳細BINDING: BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129
鎖名残基詳細
ASER98
BSER98
CSER98

site_idSWS_FT_FI17
残基数3
詳細BINDING: BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.26
鎖名残基詳細
ATRP112
BTRP112
CTRP112

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件を2024-09-18に公開中

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