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4UWU

Lysozyme soaked with a ruthenium based CORM with a pyridine ligand (complex 7)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0003824molecular_functioncatalytic activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0005794cellular_componentGolgi apparatus
A0016231molecular_functionbeta-N-acetylglucosaminidase activity
A0016787molecular_functionhydrolase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0042802molecular_functionidentical protein binding
A0050829biological_processdefense response to Gram-negative bacterium
A0050830biological_processdefense response to Gram-positive bacterium
A0051672biological_processobsolete catabolism by organism of cell wall peptidoglycan in other organism
Functional Information from PDB Data
site_idAC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 1130
ChainResidue
ATYR23
AASN113

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 1131
ChainResidue
ASER60
ACYS64
ASER72
AARG73
AHOH2090
AHOH2091

site_idAC3
Number of Residues7
DetailsBinding site for residues FMT A1132 and RU A1136
ChainResidue
AASP87
AILE88
ACMO1133
AHOH2021
AHOH2023
AHOH2158
AHIS15

site_idAC4
Number of Residues7
DetailsBinding site for residues FMT A1132 and RU A1136
ChainResidue
AHIS15
AASP87
AILE88
ACMO1133
AHOH2021
AHOH2023
AHOH2158

site_idAC5
Number of Residues7
DetailsBinding site for residues CMO A1133 and RU A1136
ChainResidue
AALA11
AARG14
AHIS15
AFMT1132
AHOH2021
AHOH2023
AHOH2158

site_idAC6
Number of Residues6
DetailsBinding site for residues CMO A1134 and RU A1137
ChainResidue
AASP119
AHOH2149
AHOH2150
AHOH2151
AHOH2160
AHOH2161

site_idAC7
Number of Residues6
DetailsBinding site for residues CMO A1134 and RU A1137
ChainResidue
AASP119
AHOH2149
AHOH2150
AHOH2151
AHOH2160
AHOH2161

site_idAC8
Number of Residues6
DetailsBinding site for residues CMO A1135 and RU A1142
ChainResidue
AGLU35
AASP52
AGLN57
AHOH2059
AHOH2084
AHOH2132

site_idAC9
Number of Residues6
DetailsBinding site for residues CMO A1135 and RU A1142
ChainResidue
AGLU35
AASP52
AGLN57
AHOH2059
AHOH2084
AHOH2132

site_idBC1
Number of Residues9
DetailsBinding site for residues RU A1138 and RU A1139
ChainResidue
AASP101
AHOH2011
AHOH2124
AHOH2125
AHOH2126
AHOH2127
AHOH2128
AHOH2162
AHOH2163

site_idBC2
Number of Residues9
DetailsBinding site for residues RU A1140 and RU A1141
ChainResidue
AASP18
AHOH2018
AHOH2025
AHOH2026
AHOH2027
AHOH2028
AHOH2164
AHOH2165
AHOH2166

Functional Information from PROSITE/UniProt
site_idPS00128
Number of Residues19
DetailsGLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC
ChainResidueDetails
ACYS76-CYS94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues128
DetailsDomain: {"description":"C-type lysozyme","evidences":[{"source":"PROSITE-ProRule","id":"PRU00680","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsBinding site: {}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 203
ChainResidueDetails
AGLU35hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AASN46
AASP48
ASER50
AASP52covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction
AASN59

247536

PDB entries from 2026-01-14

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