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4UWN

Lysozyme soaked with a ruthenium based CORM with a methione oxide ligand (complex 6b)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0016231molecular_functionbeta-N-acetylglucosaminidase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0042802molecular_functionidentical protein binding
A0050829biological_processdefense response to Gram-negative bacterium
A0050830biological_processdefense response to Gram-positive bacterium
A0051672biological_processobsolete catabolism by organism of cell wall peptidoglycan in other organism
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 1130
ChainResidue
ATYR23
AASN113
AHOH2025

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 1131
ChainResidue
ASER60
ACYS64
ASER72
AARG73
AHOH2076
AHOH2080

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE RU A 1134
ChainResidue
AASP52
AHOH2043
AHOH2071
AHOH2147

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE RU A 1135
ChainResidue
AASP119
AHOH2134
AHOH2136
AHOH2148

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 1138
ChainResidue
ATRP63
ALEU75
AASP101
AHOH2114
AHOH2136

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 1139
ChainResidue
AARG128
ALEU129
ALEU129
AHOH2142
AHOH2142

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CL A 1140
ChainResidue
AASN65
AGLY67
AARG68
ATHR69
ASER72
AHOH2076
AHOH2079

site_idAC8
Number of Residues6
DetailsBinding site for residues RU A1132 and CMO A1136
ChainResidue
AHIS15
AILE88
AHOH2017
AHOH2019
AHOH2020
AHOH2145

site_idAC9
Number of Residues6
DetailsBinding site for residues RU A1133 and CMO A1137
ChainResidue
ALYS13
AASP18
ALEU129
AHOH2015
AHOH2022
AHOH2146

site_idBC1
Number of Residues6
DetailsBinding site for residues RU A1133 and CMO A1137
ChainResidue
ALYS13
AASP18
ALEU129
AHOH2015
AHOH2022
AHOH2146

Functional Information from PROSITE/UniProt
site_idPS00128
Number of Residues19
DetailsGLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC
ChainResidueDetails
ACYS76-CYS94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU35
AASP52

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING:
ChainResidueDetails
AASP101

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 203
ChainResidueDetails
AGLU35hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AASN46
AASP48
ASER50
AASP52covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction
AASN59

225158

PDB entries from 2024-09-18

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