Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4UTX

Crystal structure of zebrafish Sirtuin 5 in complex with 3-nitro- propionylated CPS1-peptide

Functional Information from GO Data
ChainGOidnamespacecontents
A0036054molecular_functionprotein-malonyllysine demalonylase activity
A0036055molecular_functionprotein-succinyllysine desuccinylase activity
A0070403molecular_functionNAD+ binding
B0036054molecular_functionprotein-malonyllysine demalonylase activity
B0036055molecular_functionprotein-succinyllysine desuccinylase activity
B0070403molecular_functionNAD+ binding
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE 3NP C 1004
ChainResidue
AARG67
ATYR98
AARG101
AVAL216
AVAL217
APHE219
AEDO1300
CLYS4

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1299
ChainResidue
ACYS165
ACYS203
ACYS208
ACYS162

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1299
ChainResidue
BCYS162
BCYS165
BCYS203
BCYS208

site_idAC4
Number of Residues12
DetailsBINDING SITE FOR RESIDUE EPE B 1300
ChainResidue
ATHR229
AGLU232
BALA78
BALA82
BTYR98
BARG101
BHIS154
BVAL217
BTRP218
BPHE219
BGLU221
BTYR251

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS B 1301
ChainResidue
BARG144
BALA145
BGLY146
BHOH2011

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1300
ChainResidue
AGLN136
AASN137
AHIS154
C3NP1004

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1301
ChainResidue
AGLY245
AASN271
AMET272
AGLU273

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO B 1302
ChainResidue
BASN137
BILE138
BASP139

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA B 1303
ChainResidue
BASP224
BASP224
BASP226
BASP226

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU00236","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues66
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_03160","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q8C196","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

239149

PDB entries from 2025-07-23

PDB statisticsPDBj update infoContact PDBjnumon