4UTX
Crystal structure of zebrafish Sirtuin 5 in complex with 3-nitro- propionylated CPS1-peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-07-05 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 87.490, 87.490, 313.790 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.380 - 3.100 |
R-factor | 0.19722 |
Rwork | 0.194 |
R-free | 0.26189 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2nyr |
RMSD bond length | 0.013 |
RMSD bond angle | 1.704 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.200 |
High resolution limit [Å] | 3.100 | 3.100 |
Rmerge | 0.210 | 1.310 |
Number of reflections | 13762 | |
<I/σ(I)> | 14.3 | 2.1 |
Completeness [%] | 99.9 | 100 |
Redundancy | 11.5 | 10.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.5 | 22% PEG3350, 0.1 M HEPES PH 7.5 |