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4U4S

Crystal structure of the GluA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and BPAM25 at 1.90 A resolution.

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue 3C1 A 801
ChainResidue
APRO494
BLEU751
BSER754
ASER729
ALYS730
AGLY731
BLYS493
BPRO494
BPHE495
BMET496
BSER497

site_idAC2
Number of Residues8
Detailsbinding site for residue SO4 A 802
ChainResidue
AASP651
ASER652
ALYS656
AARG660
AHOH973
AHOH999
AHOH1060
AHOH1085

site_idAC3
Number of Residues3
Detailsbinding site for residue SO4 A 803
ChainResidue
AARG661
AHOH1081
BLYS752

site_idAC4
Number of Residues3
Detailsbinding site for residue GOL A 804
ChainResidue
ACYS436
ALEU742
AALA745

site_idAC5
Number of Residues4
Detailsbinding site for residue GOL A 805
ChainResidue
AARG660
ATRP671
AARG675
AHOH1090

site_idAC6
Number of Residues4
Detailsbinding site for residue ACT A 806
ChainResidue
AHIS435
AALA749
AHOH992
BTYR483

site_idAC7
Number of Residues6
Detailsbinding site for residue ACT A 807
ChainResidue
AMET496
ASER497
AHOH984
AHOH1002
BSER729
B3C1801

site_idAC8
Number of Residues4
Detailsbinding site for residue ACT A 808
ChainResidue
AARG420
AHOH902
AHOH969
BLYS695

site_idAC9
Number of Residues6
Detailsbinding site for residue ACT A 809
ChainResidue
AGLU486
AASP490
APHE491
BLYS493
BASN747
BHOH1091

site_idAD1
Number of Residues1
Detailsbinding site for residue CL A 810
ChainResidue
AALA665

site_idAD2
Number of Residues13
Detailsbinding site for residue GLU A 811
ChainResidue
ATYR450
APRO478
ALEU479
ATHR480
AARG485
AGLY653
ASER654
ATHR655
AGLU705
ATYR732
AHOH949
AHOH956
AHOH1064

site_idAD3
Number of Residues11
Detailsbinding site for residue 3C1 B 801
ChainResidue
ALYS493
APRO494
APHE495
AMET496
ASER754
AACT807
BPRO494
BSER729
BLYS730
BGLY731
BHOH1082

site_idAD4
Number of Residues7
Detailsbinding site for residue SO4 B 802
ChainResidue
BSER652
BLYS656
BARG660
BACT807
BHOH980
BHOH1070
BHOH1088

site_idAD5
Number of Residues9
Detailsbinding site for residue GOL B 803
ChainResidue
BGLY451
BALA452
BARG453
BTRP460
BARG485
BGLU657
BHOH1006
BHOH1008
BHOH1070

site_idAD6
Number of Residues4
Detailsbinding site for residue GOL B 804
ChainResidue
BARG660
BTRP671
BARG675
BACT807

site_idAD7
Number of Residues4
Detailsbinding site for residue PEG B 805
ChainResidue
BGLU416
BGLY417
BARG420
BHOH1101

site_idAD8
Number of Residues3
Detailsbinding site for residue ACT B 806
ChainResidue
BARG420
BHOH1047
BHIS412

site_idAD9
Number of Residues7
Detailsbinding site for residue ACT B 807
ChainResidue
BLYS656
BARG660
BARG675
BPHE682
BSO4802
BGOL804
BHOH1089

site_idAE1
Number of Residues5
Detailsbinding site for residue ACT B 808
ChainResidue
ASER729
BMET496
BSER497
BHOH984
BHOH1054

site_idAE2
Number of Residues5
Detailsbinding site for residue ACT B 809
ChainResidue
ALYS493
AHOH1087
BGLU486
BASP490
BPHE491

site_idAE3
Number of Residues2
Detailsbinding site for residue CL B 810
ChainResidue
BLYS393
BTHR394

site_idAE4
Number of Residues14
Detailsbinding site for residue GLU B 811
ChainResidue
BTYR450
BPRO478
BLEU479
BTHR480
BARG485
BLEU650
BGLY653
BSER654
BTHR655
BGLU705
BTYR732
BHOH955
BHOH970
BHOH979

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:11086992, ECO:0000269|PubMed:16483599, ECO:0007744|PDB:1FTJ, ECO:0007744|PDB:2CMO
ChainResidueDetails
APRO478
BSER654
BTHR655
BGLU705
ATHR480
AARG485
ASER654
ATHR655
AGLU705
BPRO478
BTHR480
BARG485

site_idSWS_FT_FI2
Number of Residues6
DetailsSITE: Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
ChainResidueDetails
AARG453
AARG660
ALYS752
BARG453
BARG660
BLYS752

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
ChainResidueDetails
AILE633
BILE633

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER662
BSER662

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER696
BSER696

site_idSWS_FT_FI6
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN392
BASN392

222415

PDB entries from 2024-07-10

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