Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4TZZ

Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0005737cellular_componentcytoplasm
A0005840cellular_componentribosome
A1990904cellular_componentribonucleoprotein complex
D0003723molecular_functionRNA binding
D0005737cellular_componentcytoplasm
D0005840cellular_componentribosome
D1990904cellular_componentribonucleoprotein complex
G0003723molecular_functionRNA binding
G0005737cellular_componentcytoplasm
G0005840cellular_componentribosome
G1990904cellular_componentribonucleoprotein complex
J0003723molecular_functionRNA binding
J0005737cellular_componentcytoplasm
J0005840cellular_componentribosome
J1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues1
Detailsbinding site for residue MG C 201
ChainResidue
CG15

site_idAC2
Number of Residues2
Detailsbinding site for residue MG C 202
ChainResidue
CC102
FA39

site_idAC3
Number of Residues2
Detailsbinding site for residue MG C 203
ChainResidue
CA11
CG12

site_idAC4
Number of Residues3
Detailsbinding site for residue MG E 101
ChainResidue
EA9
EU11
EU12

site_idAC5
Number of Residues2
Detailsbinding site for residue MG E 102
ChainResidue
EA74
EG72

site_idAC6
Number of Residues2
Detailsbinding site for residue MG E 103
ChainResidue
EG43
EG44

site_idAC7
Number of Residues4
Detailsbinding site for residue MG E 104
ChainResidue
EU46
EC47
EC49
EG50

site_idAC8
Number of Residues1
Detailsbinding site for residue MG E 105
ChainResidue
EG72

site_idAC9
Number of Residues2
Detailsbinding site for residue MG E 106
ChainResidue
EU8
EA14

site_idAD1
Number of Residues3
Detailsbinding site for residue MG F 201
ChainResidue
CA39
CA46
FC102

site_idAD2
Number of Residues1
Detailsbinding site for residue MG F 202
ChainResidue
FG59

site_idAD3
Number of Residues3
Detailsbinding site for residue MG F 203
ChainResidue
FA36
FU37
FA71

site_idAD4
Number of Residues1
Detailsbinding site for residue MG H 101
ChainResidue
HG41

site_idAD5
Number of Residues1
Detailsbinding site for residue MG H 102
ChainResidue
HA37

site_idAD6
Number of Residues1
Detailsbinding site for residue MG H 103
ChainResidue
HG52

site_idAD7
Number of Residues1
Detailsbinding site for residue MG H 104
ChainResidue
HC27

site_idAD8
Number of Residues2
Detailsbinding site for residue MG H 105
ChainResidue
HU8
HA9

site_idAD9
Number of Residues3
Detailsbinding site for residue MG I 201
ChainResidue
IC102
LA39
LA46

site_idAE1
Number of Residues2
Detailsbinding site for residue MG I 202
ChainResidue
IA83
IG84

site_idAE2
Number of Residues2
Detailsbinding site for residue MG I 203
ChainResidue
IA11
IG12

site_idAE3
Number of Residues1
Detailsbinding site for residue MG I 205
ChainResidue
IG67

site_idAE4
Number of Residues3
Detailsbinding site for residue MG L 201
ChainResidue
IA39
IA46
LC102

site_idAE5
Number of Residues2
Detailsbinding site for residue MG L 202
ChainResidue
LA11
LG12

Functional Information from PROSITE/UniProt
site_idPS00709
Number of Residues25
DetailsRIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. AksiiiGtKqtVKalKrGsvKeVVV
ChainResidueDetails
AALA9-VAL33

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon