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4TWS

Gadolinium Derivative of Tetragonal Hen Egg-White Lysozyme at 1.45 A Resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0003824molecular_functioncatalytic activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0008152biological_processmetabolic process
A0016231molecular_functionbeta-N-acetylglucosaminidase activity
A0016787molecular_functionhydrolase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0042802molecular_functionidentical protein binding
A0050829biological_processdefense response to Gram-negative bacterium
A0050830biological_processdefense response to Gram-positive bacterium
A0051672biological_processobsolete catabolism by organism of cell wall peptidoglycan in other organism
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue GD A 201
ChainResidue
ADO3202
AHOH492

site_idAC2
Number of Residues19
Detailsbinding site for residue DO3 A 202
ChainResidue
AGD201
ADO3204
ADO3206
ACL219
AHOH323
AHOH343
AHOH378
AHOH419
AHOH492
AHOH493
AHOH505
AHOH511
ATRP62
ATRP63
ALEU75
AASP101
AASP119
AGLN121
AARG125

site_idAC3
Number of Residues5
Detailsbinding site for residue GD A 203
ChainResidue
ADO3204
AGD205
ADO3206
AHOH493
AHOH509

site_idAC4
Number of Residues16
Detailsbinding site for residue DO3 A 204
ChainResidue
AARG5
AGLY117
AALA122
ATRP123
ADO3202
AGD203
AGD205
ADO3206
ACL219
AHOH318
AHOH323
AHOH391
AHOH492
AHOH493
AHOH494
AHOH509

site_idAC5
Number of Residues5
Detailsbinding site for residue GD A 205
ChainResidue
AGD203
ADO3204
ADO3206
AHOH494
AHOH509

site_idAC6
Number of Residues24
Detailsbinding site for residue DO3 A 206
ChainResidue
AARG5
AASP101
ATHR118
AASP119
AALA122
ADO3202
AGD203
ADO3204
AGD205
ACL219
AHOH304
AHOH307
AHOH310
AHOH317
AHOH323
AHOH391
AHOH425
AHOH440
AHOH445
AHOH492
AHOH493
AHOH494
AHOH509
AHOH539

site_idAC7
Number of Residues4
Detailsbinding site for residue CL A 207
ChainResidue
ATYR23
AASN113
ANA220
AHOH407

site_idAC8
Number of Residues3
Detailsbinding site for residue CL A 208
ChainResidue
ASER24
AGLY26
AGLN121

site_idAC9
Number of Residues7
Detailsbinding site for residue CL A 209
ChainResidue
AASN65
AGLY67
AARG68
ATHR69
ASER72
AHOH514
AHOH556

site_idAD1
Number of Residues3
Detailsbinding site for residue CL A 210
ChainResidue
AILE88
AHOH441
AHOH465

site_idAD2
Number of Residues6
Detailsbinding site for residue CL A 211
ChainResidue
AGLY49
ASER50
ATHR51
AASP66
AARG68
ATHR69

site_idAD3
Number of Residues6
Detailsbinding site for residue CL A 212
ChainResidue
ASER91
ATYR53
AGLY54
AILE55
ALEU56
AGLN57

site_idAD4
Number of Residues5
Detailsbinding site for residue CL A 213
ChainResidue
AGLN41
ATHR43
AARG45
ATYR53
AARG68

site_idAD5
Number of Residues4
Detailsbinding site for residue CL A 214
ChainResidue
AASN65
APRO79
ANA224
AHOH435

site_idAD6
Number of Residues6
Detailsbinding site for residue CL A 215
ChainResidue
AGLY22
ASER24
AASN27
AARG114
AHOH433
AHOH453

site_idAD7
Number of Residues5
Detailsbinding site for residue CL A 216
ChainResidue
AGLY4
ACYS6
AGLU7
AHOH409
AHOH523

site_idAD8
Number of Residues4
Detailsbinding site for residue CL A 217
ChainResidue
AALA42
AASN44
AARG68
AHOH348

site_idAD9
Number of Residues1
Detailsbinding site for residue CL A 218
ChainResidue
AHOH525

site_idAE1
Number of Residues6
Detailsbinding site for residue CL A 219
ChainResidue
AARG5
ADO3202
ADO3204
ADO3206
AHOH318
AHOH323

site_idAE2
Number of Residues5
Detailsbinding site for residue NA A 220
ChainResidue
AARG21
ATYR23
AARG114
ACL207
AHOH346

site_idAE3
Number of Residues6
Detailsbinding site for residue NA A 221
ChainResidue
ASER60
ACYS64
ASER72
AARG73
AHOH514
AHOH521

site_idAE4
Number of Residues5
Detailsbinding site for residue NA A 222
ChainResidue
AVAL2
AASN65
AGLY67
AHOH363
AHOH482

site_idAE5
Number of Residues7
Detailsbinding site for residue NA A 223
ChainResidue
AALA82
ASER85
AASP87
AILE88
AALA90
ASER91
AHOH515

site_idAE6
Number of Residues6
Detailsbinding site for residue NA A 224
ChainResidue
AASN74
AASN77
AILE78
APRO79
ACL214
AHOH559

Functional Information from PROSITE/UniProt
site_idPS00128
Number of Residues19
DetailsGLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC
ChainResidueDetails
ACYS76-CYS94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU35
AASP52

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING:
ChainResidueDetails
AASP101

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 203
ChainResidueDetails
AGLU35hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AASN46
AASP48
ASER50
AASP52covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction
AASN59

218853

PDB entries from 2024-04-24

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