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4TVA

Universal Pathway for Post-Transfer Editing Reactions: Insight from Crystal structure of TthPheRS with Puromycine

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0000166molecular_functionnucleotide binding
A0000287molecular_functionmagnesium ion binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004826molecular_functionphenylalanine-tRNA ligase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006412biological_processtranslation
A0006432biological_processphenylalanyl-tRNA aminoacylation
A0016874molecular_functionligase activity
A0043039biological_processtRNA aminoacylation
A0046872molecular_functionmetal ion binding
B0000049molecular_functiontRNA binding
B0000166molecular_functionnucleotide binding
B0000287molecular_functionmagnesium ion binding
B0003723molecular_functionRNA binding
B0004812molecular_functionaminoacyl-tRNA ligase activity
B0004826molecular_functionphenylalanine-tRNA ligase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006412biological_processtranslation
B0006432biological_processphenylalanyl-tRNA aminoacylation
B0009328cellular_componentphenylalanine-tRNA ligase complex
B0016874molecular_functionligase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue PHE A 401
ChainResidue
ATRP149
AALA283
AALA314
APHE315
AGLY316
AHIS178
ASER180
AARG204
AGLN218
AGLU220
APHE258
APHE260
AGLY282

site_idAC2
Number of Residues11
Detailsbinding site for residue PUY B 801
ChainResidue
BVAL246
BTHR249
BASN250
BPRO259
BMET260
BHIS261
BLEU286
BGLY318
BGLU323
BGLU334
BHOH953

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues108
DetailsDomain: {"description":"tRNA-binding"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues75
DetailsDomain: {"description":"B5"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues92
DetailsDomain: {"description":"FDX-ACB"}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 539
ChainResidueDetails
ATRP149electrostatic stabiliser
AHIS178electrostatic stabiliser
AARG204electrostatic stabiliser
AGLN218electrostatic stabiliser
AVAL261steric role
AALA314steric role

238895

PDB entries from 2025-07-16

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