Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

4TL8

Crystal structure of N-terminal C1 domain of KaiC

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005524	molecular_function	ATP binding
B	0005524	molecular_function	ATP binding
C	0005524	molecular_function	ATP binding
D	0005524	molecular_function	ATP binding
E	0005524	molecular_function	ATP binding
F	0005524	molecular_function	ATP binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue MG A 301

Chain	Residue
A	THR53
A	AGS303
A	HOH488
A	HOH489
A	HOH490

site_id	AC2
Number of Residues	3
Details	binding site for residue CL A 302

Chain	Residue
A	ARG218
A	THR238
A	ILE239

site_id	AC3
Number of Residues	27
Details	binding site for residue AGS A 303

Chain	Residue
A	GLY49
A	THR50
A	GLY51
A	LYS52
A	THR53
A	LEU54
A	SER89
A	PHE90
A	ARG218
A	ILE239
A	THR240
A	ASP241
A	MG301
A	HOH418
A	HOH447
A	HOH488
A	HOH489
A	HOH490
A	HOH492
B	PHE199
B	LYS224
B	LEU225
B	ARG226
B	THR228
B	HIS230
B	HOH441
A	SER48

site_id	AC4
Number of Residues	5
Details	binding site for residue MG B 301

Chain	Residue
B	THR53
B	AGS303
B	HOH537
B	HOH538
B	HOH539

site_id	AC5
Number of Residues	4
Details	binding site for residue CL B 302

Chain	Residue
B	ARG218
B	THR238
B	ILE239
B	HOH533

site_id	AC6
Number of Residues	28
Details	binding site for residue AGS B 303

Chain	Residue
B	SER48
B	GLY49
B	THR50
B	GLY51
B	LYS52
B	THR53
B	LEU54
B	SER89
B	PHE90
B	ARG218
B	ILE239
B	THR240
B	ASP241
B	MG301
B	HOH413
B	HOH430
B	HOH439
B	HOH531
B	HOH537
B	HOH538
B	HOH539
B	HOH549
C	PHE199
C	LYS224
C	LEU225
C	ARG226
C	THR228
C	HIS230

site_id	AC7
Number of Residues	5
Details	binding site for residue MG C 301

Chain	Residue
C	THR53
C	AGS303
C	HOH541
C	HOH542
C	HOH543

site_id	AC8
Number of Residues	3
Details	binding site for residue CL C 302

Chain	Residue
C	ARG218
C	THR238
C	ILE239

site_id	AC9
Number of Residues	30
Details	binding site for residue AGS C 303

Chain	Residue
C	HOH543
C	HOH555
C	HOH562
D	PHE199
D	LYS224
D	LEU225
D	ARG226
D	THR228
D	SER229
D	HIS230
D	HOH544
C	SER48
C	GLY49
C	THR50
C	GLY51
C	LYS52
C	THR53
C	LEU54
C	SER89
C	PHE90
C	ARG218
C	ILE239
C	THR240
C	ASP241
C	MG301
C	HOH431
C	HOH444
C	HOH511
C	HOH541
C	HOH542

site_id	AD1
Number of Residues	5
Details	binding site for residue MG D 301

Chain	Residue
D	THR53
D	AGS303
D	HOH541
D	HOH542
D	HOH543

site_id	AD2
Number of Residues	3
Details	binding site for residue CL D 302

Chain	Residue
D	ARG218
D	THR238
D	ILE239

site_id	AD3
Number of Residues	29
Details	binding site for residue AGS D 303

Chain	Residue
D	SER48
D	GLY49
D	THR50
D	GLY51
D	LYS52
D	THR53
D	LEU54
D	SER89
D	PHE90
D	ARG218
D	ILE239
D	THR240
D	ASP241
D	MG301
D	HOH447
D	HOH473
D	HOH475
D	HOH533
D	HOH541
D	HOH542
D	HOH543
D	HOH553
E	PHE199
E	LYS224
E	LEU225
E	ARG226
E	THR228
E	HIS230
E	HOH425

site_id	AD4
Number of Residues	5
Details	binding site for residue MG E 301

Chain	Residue
E	THR53
E	AGS303
E	HOH515
E	HOH516
E	HOH517

site_id	AD5
Number of Residues	3
Details	binding site for residue CL E 302

Chain	Residue
E	ARG218
E	THR238
E	ILE239

site_id	AD6
Number of Residues	29
Details	binding site for residue AGS E 303

Chain	Residue
E	SER48
E	GLY49
E	THR50
E	GLY51
E	LYS52
E	THR53
E	LEU54
E	SER89
E	PHE90
E	ARG218
E	ILE239
E	ASP241
E	MG301
E	HOH427
E	HOH447
E	HOH477
E	HOH515
E	HOH516
E	HOH517
E	HOH531
F	PHE199
F	LYS224
F	LEU225
F	ARG226
F	THR228
F	HIS230
F	HOH481
F	HOH522
F	HOH537

site_id	AD7
Number of Residues	28
Details	binding site for residue AGS F 301

Chain	Residue
A	PHE199
A	LYS224
A	LEU225
A	ARG226
A	GLY227
A	THR228
A	SER229
A	HIS230
A	LYS232
A	HOH420
F	SER48
F	GLY49
F	THR50
F	GLY51
F	LYS52
F	THR53
F	LEU54
F	PHE90
F	ARG218
F	ILE239
F	ASP241
F	MG302
F	HOH426
F	HOH427
F	HOH428
F	HOH436
F	HOH513
F	HOH514

site_id	AD8
Number of Residues	6
Details	binding site for residue MG F 302

Chain	Residue
F	THR53
F	ASP145
F	AGS301
F	HOH428
F	HOH513
F	HOH514

site_id	AD9
Number of Residues	4
Details	binding site for residue CL F 303

Chain	Residue
F	ARG218
F	THR238
F	ILE239
F	HOH526

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	6
Details	ACT_SITE: Proton acceptor in CI (KaiC 1) => ECO:0000305\|PubMed:22304631

Chain	Residue	Details
A	GLU77
B	GLU77
C	GLU77
D	GLU77
E	GLU77
F	GLU77

site_id	SWS_FT_FI2
Number of Residues	72
Details	BINDING: BINDING => ECO:0000255\|HAMAP-Rule:MF_01836, ECO:0000269\|PubMed:15304218, ECO:0000269\|PubMed:16628225, ECO:0000269\|PubMed:22304631, ECO:0007744\|PDB:1TF7, ECO:0007744\|PDB:2GBL, ECO:0007744\|PDB:4DUG

Chain	Residue	Details
A	GLY49
A	HIS230
A	THR240
A	ASP241
B	GLY49
B	THR50
B	GLY51
B	LYS52
B	LEU54
B	SER89
B	LYS224
A	THR50
B	ARG226
B	THR228
B	HIS230
B	THR240
B	ASP241
C	GLY49
C	THR50
C	GLY51
C	LYS52
C	LEU54
A	GLY51
C	SER89
C	LYS224
C	ARG226
C	THR228
C	HIS230
C	THR240
C	ASP241
D	GLY49
D	THR50
D	GLY51
A	LYS52
D	LYS52
D	LEU54
D	SER89
D	LYS224
D	ARG226
D	THR228
D	HIS230
D	THR240
D	ASP241
E	GLY49
A	LEU54
E	THR50
E	GLY51
E	LYS52
E	LEU54
E	SER89
E	LYS224
E	ARG226
E	THR228
E	HIS230
E	THR240
A	SER89
E	ASP241
F	GLY49
F	THR50
F	GLY51
F	LYS52
F	LEU54
F	SER89
F	LYS224
F	ARG226
F	THR228
A	LYS224
F	HIS230
F	THR240
F	ASP241
A	ARG226
A	THR228

site_id	SWS_FT_FI3
Number of Residues	6
Details	BINDING: BINDING => ECO:0000255\|HAMAP-Rule:MF_01836, ECO:0007744\|PDB:4DUG, ECO:0007744\|PDB:4TL6, ECO:0007744\|PDB:7DXQ

Chain	Residue	Details
A	THR53
B	THR53
C	THR53
D	THR53
E	THR53
F	THR53

site_id	SWS_FT_FI4
Number of Residues	6
Details	BINDING: BINDING => ECO:0000255\|HAMAP-Rule:MF_01836, ECO:0000269\|PubMed:15304218, ECO:0000269\|PubMed:16628225, ECO:0007744\|PDB:1TF7, ECO:0007744\|PDB:2GBL

Chain	Residue	Details
A	LEU225
B	LEU225
C	LEU225
D	LEU225
E	LEU225
F	LEU225

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)