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4S22

Crystal structure of K29 linked di-Ubiquitin

Functional Information from PDB Data
site_idAC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 101
ChainResidue
ASER65

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 102
ChainResidue
ALEU73

site_idAC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD B 101
ChainResidue
BLEU71

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD B 102
ChainResidue
BGLY47

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 103
ChainResidue
BALA46
BLYS48

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD D 101
ChainResidue
DGLU16

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL D 102
ChainResidue
DARG74
DALA46
DLYS48

Functional Information from PROSITE/UniProt
site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
ALYS27-ASP52

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsSITE: Interacts with activating enzyme
ChainResidueDetails
AARG54
AARG72
BARG54
BARG72
CARG54
CARG72
DARG54
DARG72

site_idSWS_FT_FI2
Number of Residues4
DetailsSITE: Essential for function
ChainResidueDetails
AHIS68
BHIS68
CHIS68
DHIS68

site_idSWS_FT_FI3
Number of Residues4
DetailsMOD_RES: Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62987
ChainResidueDetails
ASER65
BSER65
CSER65
DSER65

site_idSWS_FT_FI4
Number of Residues4
DetailsMOD_RES: ADP-ribosylglycine => ECO:0000250|UniProtKB:P62987
ChainResidueDetails
AGLY76
BGLY76
CGLY76
DGLY76

site_idSWS_FT_FI5
Number of Residues28
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62987
ChainResidueDetails
DLYS29
DLYS33
DLYS48
DLYS63
ALYS6
ALYS11
ALYS27
ALYS29
ALYS33
ALYS48
ALYS63
BLYS6
BLYS11
BLYS27
BLYS29
BLYS33
BLYS48
BLYS63
CLYS6
CLYS11
CLYS27
CLYS29
CLYS33
CLYS48
CLYS63
DLYS6
DLYS11
DLYS27

site_idSWS_FT_FI6
Number of Residues8
DetailsCROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
ChainResidueDetails
CGLY76
DGLY76
AGLY76
BGLY76

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PDB entries from 2024-04-17

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